|
|
eF-site ID
|
2vmk-D |
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PDB Code
|
2vmk |
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Chain
|
D |
|
click to enlarge
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Title
|
Crystal Structure of E. coli RNase E Apoprotein - Catalytic Domain |
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Classification
|
HYDROLASE |
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Compound
|
RIBONUCLEASE E |
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Source
|
Escherichia coli (strain K12) (RNE_ECOLI) |
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Sequence
|
D: |
MKRMLINATLRVALVDGQRLYDLDIQKKANIYKGKITRIE
PSLEAAFVDAERHGFLPLKEIAREYFPRPNIKDVLREGQE
VIVQIDKEERALTTFISLAGSYLVLMPNNPRAGGDDRTEL
KEALASLELPEGMGLIVRTASAEALQWDLSFRLKHWEAIK
KAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPK
VLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQI
ESAFQREVRLPSGGSIVIDSTEALTAIDINSADIEETAFN
TNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVEN
RLREAVRQDRARIQISHISRFGLLEMSRQRLSLGESSHHV
CPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIV
PVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQMETPH
YHVLRVRKGEETPTLSYMLPKLHEEAMALPSE
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Description
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Functional site
|
|
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1)
|
chain |
D |
| residue |
404 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN D1516
|
| source |
: AC2
|
|
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2)
|
chain |
D |
| residue |
407 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN D1516
|
| source |
: AC2
|
|
|
3)
|
chain |
D |
| residue |
404 |
| type |
BINDING |
| sequence |
C
|
| description |
BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
4)
|
chain |
D |
| residue |
407 |
| type |
BINDING |
| sequence |
C
|
| description |
BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
5)
|
chain |
D |
| residue |
303 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000269|PubMed:16237448
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
6)
|
chain |
D |
| residue |
346 |
| type |
BINDING |
| sequence |
D
|
| description |
BINDING => ECO:0000269|PubMed:16237448
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|