eF-site ID 2vkm-C
PDB Code 2vkm
Chain C

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Title Crystal structure of GRL-8234 bound to BACE (Beta-secretase)
Classification HYDROLASE
Compound BETA-SECRETASE 1
Source Homo sapiens (Human) (BACE1_HUMAN)
Sequence C:  GSFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSS
NFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKW
EGELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWE
GILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCG
AGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE
WYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRL
PKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTP
WNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQ
DDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAV
SACHVHDEFRTAAVEGPFVTLDMEDCGYN
Description


Functional site

1) chain C
residue 11
type
sequence G
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

2) chain C
residue 12
type
sequence Q
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

3) chain C
residue 13
type
sequence G
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

4) chain C
residue 32
type
sequence D
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

5) chain C
residue 34
type
sequence G
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

6) chain C
residue 35
type
sequence S
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

7) chain C
residue 69
type
sequence V
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

8) chain C
residue 70
type
sequence P
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

9) chain C
residue 71
type
sequence Y
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

10) chain C
residue 72
type
sequence T
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

11) chain C
residue 73
type
sequence Q
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

12) chain C
residue 108
type
sequence F
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

13) chain C
residue 110
type
sequence I
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

14) chain C
residue 115
type
sequence W
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

15) chain C
residue 118
type
sequence I
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

16) chain C
residue 228
type
sequence D
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

17) chain C
residue 229
type
sequence S
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

18) chain C
residue 230
type
sequence G
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

19) chain C
residue 231
type
sequence T
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

20) chain C
residue 232
type
sequence T
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

21) chain C
residue 233
type
sequence N
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

22) chain C
residue 235
type
sequence R
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

23) chain C
residue 307
type
sequence R
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

24) chain C
residue 325
type
sequence S
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

25) chain C
residue 335
type
sequence A
description BINDING SITE FOR RESIDUE BSD C1386
source : AC3

26) chain C
residue 111
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

27) chain C
residue 162
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

28) chain C
residue 293
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

29) chain C
residue 92
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

30) chain C
residue 32
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10094
source Swiss-Prot : SWS_FT_FI1

31) chain C
residue 228
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10094
source Swiss-Prot : SWS_FT_FI1

32) chain C
residue 65
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

33) chain C
residue 214
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

34) chain C
residue 218
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

35) chain C
residue 224
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

36) chain C
residue 238
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

37) chain C
residue 239
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

38) chain C
residue 246
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2


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