eF-site ID 2vjx-A
PDB Code 2vjx
Chain A

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Title Structural and biochemical evidence for a boat-like transition state in beta-mannosidases
Classification HYDROLASE
Compound BETA-MANNOSIDASE
Source (2VJX)
Sequence A:  NDTSEVMLLDTGWEFSQSGTEKWMPATVPGTVHQDLISHE
LLPNPFYGMNEKKIQWVENEDWEYRTSFIVSEEQLNRDGI
QLIFEGLDTYADVYLNGSLLLKADNMFVGYTLPVKSVLRK
GENHLYIYFHSPIRQTLPQYASNGFNYPADNDHHEKHLSV
FSRKAPYSYGWDWGIRMVTSGVWRPVTLRFYDIATISDYY
VRQLSLTDENARLSNELIVNQIVPQKIPAEVRVNVSLNGT
TVTEVKQQVTLQPGINHITLPAEVTNPVRWMPNGWGTPTL
YDFSAQIACGRIVAEQSHRIGLRTIRVVNEKDKDGESFYF
EVNGIPMFAKGANYIPQDALLPNVTTERYQTLFRDMKEAN
MNMVRIWGGGTYENNLFYDLADENGILVWQDFMFACTPYP
SDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALK
YWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRF
YVHSSPYLANWGRPESWGTGDSHNWGVWYGKKPFESLDTD
LPRFMSEFGFQSFPEMKTIAAFAAPEDYQIESEVMNAHQK
SSIGNSLIRTYMERDYIIPESFEDFVYVGLVLQGQGMRHG
LEAHRRNRPYCMGTLYWQLNDSWPVVSWSSIDYYGNWKAL
HYQAKRAFAPVLINPIQQNDSLSVYLISDRLDTMEQMTLE
MKVVDFDGKTLGKKIQVHSLEVPANTSKCVYRAKLDGWLT
PEDCRRSFLKLILKDKSGHQVAESVHFFRKTKDLQLPPTS
VSYQMKQTDGKCELTLFSSMLAKDIFIETPLQGARYSDNF
FDLLPGERKKVIITSPRIKKGEELPVNIKHIRETYK
Description


Functional site

1) chain A
residue 198
type
sequence W
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

2) chain A
residue 199
type
sequence D
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

3) chain A
residue 200
type
sequence W
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

4) chain A
residue 395
type
sequence W
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

5) chain A
residue 424
type
sequence C
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

6) chain A
residue 461
type
sequence N
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

7) chain A
residue 462
type
sequence E
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

8) chain A
residue 533
type
sequence W
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

9) chain A
residue 537
type
sequence Y
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

10) chain A
residue 555
type
sequence E
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

11) chain A
residue 645
type
sequence W
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

12) chain A
residue 656
type
sequence W
description BINDING SITE FOR RESIDUE IFL A1865
source : AC1

13) chain A
residue 365
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A1866
source : AC3

14) chain A
residue 648
type
sequence N
description BINDING SITE FOR RESIDUE EDO A1866
source : AC3

15) chain A
residue 649
type
sequence D
description BINDING SITE FOR RESIDUE EDO A1866
source : AC3

16) chain A
residue 659
type
sequence I
description BINDING SITE FOR RESIDUE EDO A1866
source : AC3

17) chain A
residue 660
type
sequence D
description BINDING SITE FOR RESIDUE EDO A1866
source : AC3

18) chain A
residue 519
type
sequence W
description BINDING SITE FOR RESIDUE EDO A1867
source : AC5

19) chain A
residue 525
type
sequence W
description BINDING SITE FOR RESIDUE EDO A1867
source : AC5

20) chain A
residue 530
type
sequence S
description BINDING SITE FOR RESIDUE EDO A1867
source : AC5

21) chain A
residue 532
type
sequence N
description BINDING SITE FOR RESIDUE EDO A1867
source : AC5

22) chain A
residue 548
type
sequence D
description BINDING SITE FOR RESIDUE EDO A1867
source : AC5

23) chain A
residue 549
type
sequence L
description BINDING SITE FOR RESIDUE EDO A1867
source : AC5

24) chain A
residue 550
type
sequence P
description BINDING SITE FOR RESIDUE EDO A1867
source : AC5

25) chain A
residue 553
type
sequence M
description BINDING SITE FOR RESIDUE EDO A1867
source : AC5

26) chain A
residue 328
type
sequence I
description BINDING SITE FOR RESIDUE EDO A1868
source : AC6

27) chain A
residue 329
type
sequence G
description BINDING SITE FOR RESIDUE EDO A1868
source : AC6

28) chain A
residue 449
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1868
source : AC6

29) chain A
residue 450
type
sequence N
description BINDING SITE FOR RESIDUE EDO A1868
source : AC6

30) chain A
residue 451
type
sequence H
description BINDING SITE FOR RESIDUE EDO A1868
source : AC6

31) chain A
residue 452
type
sequence A
description BINDING SITE FOR RESIDUE EDO A1868
source : AC6

32) chain A
residue 507
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1868
source : AC6

33) chain A
residue 331
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1869
source : AC7

34) chain A
residue 507
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1869
source : AC7

35) chain A
residue 465
type
sequence E
description BINDING SITE FOR RESIDUE EDO A1870
source : AC8

36) chain A
residue 468
type
sequence K
description BINDING SITE FOR RESIDUE EDO A1870
source : AC8

37) chain A
residue 469
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A1870
source : AC8

38) chain A
residue 514
type
sequence P
description BINDING SITE FOR RESIDUE EDO A1870
source : AC8

39) chain A
residue 516
type
sequence L
description BINDING SITE FOR RESIDUE EDO A1870
source : AC8

40) chain A
residue 517
type
sequence A
description BINDING SITE FOR RESIDUE EDO A1870
source : AC8

41) chain A
residue 518
type
sequence N
description BINDING SITE FOR RESIDUE EDO A1870
source : AC8

42) chain A
residue 597
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1871
source : AC9

43) chain A
residue 607
type
sequence P
description BINDING SITE FOR RESIDUE EDO A1871
source : AC9

44) chain A
residue 608
type
sequence E
description BINDING SITE FOR RESIDUE EDO A1871
source : AC9

45) chain A
residue 609
type
sequence S
description BINDING SITE FOR RESIDUE EDO A1871
source : AC9

46) chain A
residue 613
type
sequence F
description BINDING SITE FOR RESIDUE EDO A1871
source : AC9

47) chain A
residue 337
type
sequence N
description BINDING SITE FOR RESIDUE EDO A1872
source : BC1

48) chain A
residue 515
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A1872
source : BC1

49) chain A
residue 155
type
sequence Y
description BINDING SITE FOR RESIDUE EDO B1870
source : BC3

50) chain A
residue 157
type
sequence H
description BINDING SITE FOR RESIDUE EDO B1870
source : BC3

51) chain A
residue 623
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A1873
source : BC4

52) chain A
residue 626
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1873
source : BC4

53) chain A
residue 774
type
sequence H
description BINDING SITE FOR RESIDUE EDO A1873
source : BC4

54) chain A
residue 775
type
sequence F
description BINDING SITE FOR RESIDUE EDO A1873
source : BC4

55) chain A
residue 432
type
sequence T
description BINDING SITE FOR RESIDUE EDO B1871
source : BC5

56) chain A
residue 634
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1874
source : BC6

57) chain A
residue 635
type
sequence N
description BINDING SITE FOR RESIDUE EDO A1874
source : BC6

58) chain A
residue 693
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A1874
source : BC6

59) chain A
residue 442
type
sequence V
description BINDING SITE FOR RESIDUE EDO A1875
source : BC7

60) chain A
residue 446
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1875
source : BC7

61) chain A
residue 117
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A1876
source : BC9

62) chain A
residue 118
type
sequence A
description BINDING SITE FOR RESIDUE EDO A1876
source : BC9

63) chain A
residue 119
type
sequence D
description BINDING SITE FOR RESIDUE EDO A1876
source : BC9

64) chain A
residue 129
type
sequence K
description BINDING SITE FOR RESIDUE EDO A1876
source : BC9

65) chain A
residue 130
type
sequence A
description BINDING SITE FOR RESIDUE EDO A1876
source : BC9

66) chain A
residue 157
type
sequence H
description BINDING SITE FOR RESIDUE EDO A1876
source : BC9

67) chain A
residue 382
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1877
source : CC2

68) chain A
residue 840
type
sequence I
description BINDING SITE FOR RESIDUE EDO A1877
source : CC2

69) chain A
residue 43
type
sequence S
description BINDING SITE FOR RESIDUE EDO A1878
source : CC4

70) chain A
residue 44
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A1878
source : CC4

71) chain A
residue 46
type
sequence G
description BINDING SITE FOR RESIDUE EDO A1878
source : CC4

72) chain A
residue 47
type
sequence T
description BINDING SITE FOR RESIDUE EDO A1878
source : CC4

73) chain A
residue 48
type
sequence E
description BINDING SITE FOR RESIDUE EDO A1878
source : CC4

74) chain A
residue 90
type
sequence E
description BINDING SITE FOR RESIDUE EDO A1878
source : CC4

75) chain A
residue 178
type
sequence N
description BINDING SITE FOR RESIDUE EDO A1879
source : CC5

76) chain A
residue 199
type
sequence D
description BINDING SITE FOR RESIDUE EDO A1879
source : CC5

77) chain A
residue 424
type
sequence C
description BINDING SITE FOR RESIDUE EDO A1879
source : CC5

78) chain A
residue 462
type
sequence E
description BINDING SITE FOR RESIDUE EDO A1879
source : CC5

79) chain A
residue 470
type
sequence W
description BINDING SITE FOR RESIDUE EDO A1879
source : CC5

80) chain A
residue 88
type
sequence D
description BINDING SITE FOR RESIDUE EDO A1880
source : CC9

81) chain A
residue 157
type
sequence H
description BINDING SITE FOR RESIDUE EDO A1880
source : CC9

82) chain A
residue 162
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A1880
source : CC9

83) chain A
residue 775
type
sequence F
description BINDING SITE FOR RESIDUE EDO A1881
source : DC1

84) chain A
residue 777
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1881
source : DC1

85) chain A
residue 326
type
sequence H
description BINDING SITE FOR RESIDUE EDO A1882
source : DC2

86) chain A
residue 327
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1882
source : DC2

87) chain A
residue 450
type
sequence N
description BINDING SITE FOR RESIDUE EDO A1882
source : DC2

88) chain A
residue 451
type
sequence H
description BINDING SITE FOR RESIDUE EDO A1882
source : DC2

89) chain A
residue 74
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A1883
source : DC3

90) chain A
residue 568
type
sequence A
description BINDING SITE FOR RESIDUE EDO A1883
source : DC3

91) chain A
residue 571
type
sequence A
description BINDING SITE FOR RESIDUE EDO A1883
source : DC3

92) chain A
residue 572
type
sequence A
description BINDING SITE FOR RESIDUE EDO A1883
source : DC3

93) chain A
residue 573
type
sequence P
description BINDING SITE FOR RESIDUE EDO A1883
source : DC3

94) chain A
residue 576
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A1883
source : DC3

95) chain A
residue 626
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1884
source : DC5

96) chain A
residue 671
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A1884
source : DC5

97) chain A
residue 674
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1884
source : DC5

98) chain A
residue 772
type
sequence S
description BINDING SITE FOR RESIDUE EDO A1884
source : DC5

99) chain A
residue 773
type
sequence V
description BINDING SITE FOR RESIDUE EDO A1884
source : DC5

100) chain A
residue 211
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1885
source : DC6

101) chain A
residue 212
type
sequence P
description BINDING SITE FOR RESIDUE EDO A1885
source : DC6

102) chain A
residue 402
type
sequence N
description BINDING SITE FOR RESIDUE EDO A1885
source : DC6

103) chain A
residue 603
type
sequence D
description BINDING SITE FOR RESIDUE EDO A1886
source : DC7

104) chain A
residue 604
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A1886
source : DC7

105) chain A
residue 778
type
sequence K
description BINDING SITE FOR RESIDUE EDO A1886
source : DC7

106) chain A
residue 779
type
sequence T
description BINDING SITE FOR RESIDUE EDO A1886
source : DC7

107) chain A
residue 42
type
sequence F
description BINDING SITE FOR RESIDUE EDO A1887
source : DC9

108) chain A
residue 43
type
sequence S
description BINDING SITE FOR RESIDUE EDO A1887
source : DC9

109) chain A
residue 44
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A1887
source : DC9

110) chain A
residue 47
type
sequence T
description BINDING SITE FOR RESIDUE EDO A1887
source : DC9

111) chain A
residue 49
type
sequence K
description BINDING SITE FOR RESIDUE EDO A1887
source : DC9

112) chain A
residue 51
type
sequence M
description BINDING SITE FOR RESIDUE EDO A1887
source : DC9

113) chain A
residue 63
type
sequence L
description BINDING SITE FOR RESIDUE EDO A1887
source : DC9

114) chain A
residue 161
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1888
source : EC3

115) chain A
residue 162
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A1888
source : EC3

116) chain A
residue 165
type
sequence P
description BINDING SITE FOR RESIDUE EDO A1888
source : EC3

117) chain A
residue 376
type
sequence R
description BINDING SITE FOR RESIDUE EDO A1889
source : EC6

118) chain A
residue 661
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A1889
source : EC6

119) chain A
residue 662
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A1889
source : EC6

120) chain A
residue 542
type
sequence F
description BINDING SITE FOR RESIDUE EDO A1890
source : EC8

121) chain A
residue 543
type
sequence E
description BINDING SITE FOR RESIDUE EDO A1890
source : EC8

122) chain A
residue 603
type
sequence D
description BINDING SITE FOR RESIDUE EDO A1890
source : EC8

123) chain A
residue 624
type
sequence G
description BINDING SITE FOR RESIDUE EDO A1890
source : EC8

124) chain A
residue 119
type
sequence D
description BINDING SITE FOR RESIDUE EDO B1885
source : EC9

125) chain A
residue 121
type
sequence Y
description BINDING SITE FOR RESIDUE EDO B1885
source : EC9

126) chain A
residue 155
type
sequence Y
description BINDING SITE FOR RESIDUE EDO B1885
source : EC9

127) chain A
residue 107
type
sequence I
description BINDING SITE FOR RESIDUE BR A1891
source : FC1

128) chain A
residue 142
type
sequence K
description BINDING SITE FOR RESIDUE BR A1891
source : FC1

129) chain A
residue 284
type
sequence H
description BINDING SITE FOR RESIDUE BR A1892
source : FC3

130) chain A
residue 129
type
sequence K
description BINDING SITE FOR RESIDUE BR A1893
source : FC4

131) chain A
residue 157
type
sequence H
description BINDING SITE FOR RESIDUE BR A1893
source : FC4

132) chain A
residue 108
type
sequence Q
description BINDING SITE FOR RESIDUE CL A1895
source : FC9

133) chain A
residue 627
type
sequence H
description BINDING SITE FOR RESIDUE CL A1896
source : GC1

134) chain A
residue 684
type
sequence I
description BINDING SITE FOR RESIDUE CL A1896
source : GC1

135) chain A
residue 685
type
sequence Q
description BINDING SITE FOR RESIDUE CL A1896
source : GC1

136) chain A
residue 685
type
sequence Q
description BINDING SITE FOR RESIDUE CL A1897
source : GC2

137) chain A
residue 688
type
sequence D
description BINDING SITE FOR RESIDUE CL A1897
source : GC2

138) chain A
residue 337
type
sequence N
description BINDING SITE FOR RESIDUE CL A1901
source : GC6

139) chain A
residue 786
type
sequence P
description BINDING SITE FOR RESIDUE CL A1898
source : GC7

140) chain A
residue 787
type
sequence T
description BINDING SITE FOR RESIDUE CL A1898
source : GC7

141) chain A
residue 861
type
sequence E
description BINDING SITE FOR RESIDUE CL A1898
source : GC7

142) chain A
residue 300
type
sequence N
description BINDING SITE FOR RESIDUE BR A1899
source : GC8

143) chain A
residue 390
type
sequence N
description BINDING SITE FOR RESIDUE BR A1899
source : GC8

144) chain A
residue 476
type
sequence F
description BINDING SITE FOR RESIDUE CL A1900
source : HC3

145) chain A
residue 477
type
sequence T
description BINDING SITE FOR RESIDUE CL A1900
source : HC3


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