eF-site ID 2vek-AB
PDB Code 2vek
Chain A, B

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Title Structure-based enzyme engineering efforts with an inactive monomeric TIM variant: the importance of a single point mutation for generating an active site with suitable binding properties
Classification ISOMERASE
Compound TRIOSEPHOSPHATE ISOMERASE
Source null (TPIS_TRYBB)
Sequence A:  SKPQPIAAANWKSGSPSLSELIDLFNSTSINHDVQCVVAS
TFVHLAMTKERLSHPKFVIAAQNAGNADALASLKDFGVNW
IVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACIGET
LQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVW
AIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILY
GGSVNGKNARTLYQQRDVNGFLAGLKPEFVDIIKATQ
B:  SKPQPIAAANWKSGSPDSLSELIDLFNSTSINHDVQCVVA
STFVHLAMTKERLSHPKFVIAAQNAGNADALASLKDFGVN
WIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACIGE
TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPV
WAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRIL
YGGSVNGKNARTLYQQRDVNGFLAGLKPEFVDIIKATQ
Description


Functional site

1) chain A
residue 11
type
sequence N
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

2) chain A
residue 13
type
sequence K
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

3) chain A
residue 95
type
sequence H
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

4) chain A
residue 167
type
sequence E
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

5) chain A
residue 171
type
sequence A
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

6) chain A
residue 172
type
sequence I
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

7) chain A
residue 173
type
sequence G
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

8) chain A
residue 212
type
sequence G
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

9) chain A
residue 213
type
sequence S
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

10) chain A
residue 233
type
sequence A
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

11) chain A
residue 234
type
sequence G
description BINDING SITE FOR RESIDUE CIT A1251
source : AC1

12) chain B
residue 11
type
sequence N
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

13) chain B
residue 13
type
sequence K
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

14) chain B
residue 95
type
sequence H
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

15) chain B
residue 167
type
sequence E
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

16) chain B
residue 171
type
sequence A
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

17) chain B
residue 172
type
sequence I
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

18) chain B
residue 173
type
sequence G
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

19) chain B
residue 213
type
sequence S
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

20) chain B
residue 233
type
sequence A
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

21) chain B
residue 234
type
sequence G
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

22) chain B
residue 239
type
sequence K
description BINDING SITE FOR RESIDUE CIT B1251
source : AC2

23) chain B
residue 29
type
sequence N
description BINDING SITE FOR RESIDUE TBU B1252
source : AC3

24) chain B
residue 30
type
sequence S
description BINDING SITE FOR RESIDUE TBU B1252
source : AC3

25) chain B
residue 31
type
sequence T
description BINDING SITE FOR RESIDUE TBU B1252
source : AC3

26) chain B
residue 32
type
sequence S
description BINDING SITE FOR RESIDUE TBU B1252
source : AC3

27) chain B
residue 193
type
sequence W
description BINDING SITE FOR RESIDUE TBU B1252
source : AC3

28) chain B
residue 197
type
sequence K
description BINDING SITE FOR RESIDUE TBU B1252
source : AC3

29) chain A
residue 26
type
sequence D
description BINDING SITE FOR RESIDUE ASF B1253
source : AC4

30) chain A
residue 29
type
sequence N
description BINDING SITE FOR RESIDUE ASF B1253
source : AC4

31) chain A
residue 30
type
sequence S
description BINDING SITE FOR RESIDUE ASF B1253
source : AC4

32) chain B
residue 31
type
sequence T
description BINDING SITE FOR RESIDUE ASF B1253
source : AC4

33) chain B
residue 32
type
sequence S
description BINDING SITE FOR RESIDUE ASF B1253
source : AC4

34) chain B
residue 33
type
sequence I
description BINDING SITE FOR RESIDUE ASF B1253
source : AC4

35) chain B
residue 57
type
sequence H
description BINDING SITE FOR RESIDUE ASF B1253
source : AC4

36) chain B
residue 58
type
sequence P
description BINDING SITE FOR RESIDUE ASF B1253
source : AC4

37) chain B
residue 59
type
sequence K
description BINDING SITE FOR RESIDUE ASF B1253
source : AC4

38) chain B
residue 197
type
sequence K
description BINDING SITE FOR RESIDUE ASF B1253
source : AC4

39) chain A
residue 165-175
type prosite
sequence AYEPVWAIGTG
description TIM_1 Triosephosphate isomerase active site. AYEPVWAIGTG
source prosite : PS00171

40) chain B
residue 95
type ACT_SITE
sequence H
description Electrophile
source Swiss-Prot : SWS_FT_FI1

41) chain A
residue 103
type ACT_SITE
sequence G
description Electrophile
source Swiss-Prot : SWS_FT_FI1

42) chain B
residue 167
type ACT_SITE
sequence E
description Proton acceptor
source Swiss-Prot : SWS_FT_FI2

43) chain A
residue 175
type ACT_SITE
sequence G
description Proton acceptor
source Swiss-Prot : SWS_FT_FI2

44) chain B
residue 11
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI3

45) chain B
residue 13
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI3

46) chain A
residue 11
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI3

47) chain A
residue 13
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI3


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