eF-site ID 2ve6-ABCDEFGHIJKL PDB Code 2ve6 Chain A, B, C, D, E, F, G, H, I, J, K, L click to enlarge Title Crystal structure of a Murine MHC class I H2-Db molecule in complex with a photocleavable peptide Classification IMMUNE SYSTEM Compound H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN D-B ALPHA CHAIN Source (2VE6) Sequence A:  GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDA ENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRN LLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEG RDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYL EGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGT FQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP B:  MQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQML KNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHASMAEPKTVYWDRDM C:  FAPGNYXAL D:  GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDA ENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRN LLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEG RDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYL EGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGT FQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP E:  MQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQML KNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHASMAEPKTVYWDRDM F:  FAPGNYXAL G:  GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDA ENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRN LLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEG RDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYL EGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGT FQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP H:  MQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQML KNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHASMAEPKTVYWDRDM I:  FAPGNYXAL J:  GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDA ENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRN LLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEG RDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYL EGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVT LRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGT FQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRWEP K:  MQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQML KNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC RVKHASMAEPKTVYWDRDM L:  FAPGNYXAL Description Functional site 1) chain A residue 176 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 2) chain D residue 176 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 3) chain G residue 176 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 4) chain J residue 176 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000305 source Swiss-Prot : SWS_FT_FI2 5) chain A residue 256 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:3980466 source Swiss-Prot : SWS_FT_FI3 6) chain D residue 256 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:3980466 source Swiss-Prot : SWS_FT_FI3 7) chain G residue 256 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:3980466 source Swiss-Prot : SWS_FT_FI3 8) chain J residue 256 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:3980466 source Swiss-Prot : SWS_FT_FI3 9) chain A residue 86 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:3980466, ECO:0000269|PubMed:7118212 source Swiss-Prot : SWS_FT_FI1 10) chain D residue 86 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:3980466, ECO:0000269|PubMed:7118212 source Swiss-Prot : SWS_FT_FI1 11) chain G residue 86 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:3980466, ECO:0000269|PubMed:7118212 source Swiss-Prot : SWS_FT_FI1 12) chain J residue 86 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:3980466, ECO:0000269|PubMed:7118212 source Swiss-Prot : SWS_FT_FI1 13) chain B residue 78-84 type prosite sequence YACRVKH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVKH source prosite : PS00290 14) chain A residue 257-263 type prosite sequence YTCRVYH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVKH source prosite : PS00290

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