eF-site ID 2vd6-D
PDB Code 2vd6
Chain D

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Title Human adenylosuccinate lyase in complex with its substrate N6-(1,2- Dicarboxyethyl)-AMP, and its products AMP and fumarate.
Classification LYASE
Compound ADENYLOSUCCINATE LYASE
Source Homo sapiens (Human) (PUR8_HUMAN)
Sequence D:  GDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWL
WLAEAEQTLGLPITDEQIQEMKSNLENIDFKMAAEEEKRL
RHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTDLIIL
RNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQ
LTTVGKRCCLWIQDLCMDLQNLKRVRDDLRFRGVKGTTGT
QASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITGQTYT
RKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFPY
KRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDDS
ANRRICLAEAFLTADTILNTLQNISEGLVVYPKVIERRIR
QELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQAASVV
KQEGGDNDLIERIQVDAYFSPIHSQLDHLLDPSSFTGRAS
QQVQRFLEEEVYPLLKPYESVM
Description


Functional site

1) chain D
residue 20
type
sequence R
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

2) chain D
residue 21
type
sequence Y
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

3) chain D
residue 299
type
sequence M
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

4) chain D
residue 303
type
sequence R
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

5) chain D
residue 295
type
sequence K
description BINDING SITE FOR RESIDUE FUM A 1001
source : AC2

6) chain D
residue 297
type
sequence N
description BINDING SITE FOR RESIDUE CL A 2001
source : AC4

7) chain D
residue 299
type
sequence M
description BINDING SITE FOR RESIDUE CL A 2001
source : AC4

8) chain D
residue 159
type
sequence H
description BINDING SITE FOR RESIDUE AMP C 1000
source : BC2

9) chain D
residue 158
type
sequence T
description BINDING SITE FOR RESIDUE FUM C 1001
source : BC3

10) chain D
residue 159
type
sequence H
description BINDING SITE FOR RESIDUE FUM C 1001
source : BC3

11) chain D
residue 85
type
sequence R
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

12) chain D
residue 86
type
sequence H
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

13) chain D
residue 87
type
sequence D
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

14) chain D
residue 111
type
sequence T
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

15) chain D
residue 112
type
sequence S
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

16) chain D
residue 241
type
sequence Q
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

17) chain D
residue 329
type
sequence R
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

18) chain D
residue 334
type
sequence S
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

19) chain D
residue 335
type
sequence A
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

20) chain D
residue 338
type
sequence R
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

21) chain D
residue 35
type
sequence K
description BINDING SITE FOR RESIDUE GOL D 1003
source : BC7

22) chain D
residue 39
type
sequence W
description BINDING SITE FOR RESIDUE GOL D 1003
source : BC7

23) chain D
residue 87
type
sequence D
description BINDING SITE FOR RESIDUE GOL D 1003
source : BC7

24) chain D
residue 116
type
sequence G
description BINDING SITE FOR RESIDUE GOL D 1003
source : BC7

25) chain D
residue 120
type
sequence D
description BINDING SITE FOR RESIDUE GOL D 1003
source : BC7

26) chain D
residue 334
type
sequence S
description BINDING SITE FOR RESIDUE GOL D 1003
source : BC7

27) chain D
residue 338
type
sequence R
description BINDING SITE FOR RESIDUE GOL D 1003
source : BC7

28) chain D
residue 111
type
sequence T
description BINDING SITE FOR RESIDUE CL D 2002
source : BC9

29) chain D
residue 114
type
sequence Y
description BINDING SITE FOR RESIDUE CL D 2002
source : BC9

30) chain D
residue 196
type
sequence R
description BINDING SITE FOR RESIDUE CL D 2002
source : BC9

31) chain D
residue 199
type
sequence K
description BINDING SITE FOR RESIDUE CL D 2002
source : BC9

32) chain D
residue 200
type
sequence G
description BINDING SITE FOR RESIDUE CL D 2002
source : BC9

33) chain D
residue 159
type ACT_SITE
sequence H
description Proton donor/acceptor => ECO:0000269|PubMed:22812634
source Swiss-Prot : SWS_FT_FI1

34) chain D
residue 147
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI5

35) chain D
residue 295
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI5

36) chain D
residue 415
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1) => ECO:0007744|PubMed:25114211
source Swiss-Prot : SWS_FT_FI6

37) chain D
residue 20
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

38) chain D
residue 303
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

39) chain D
residue 85
type BINDING
sequence R
description in other chain
source Swiss-Prot : SWS_FT_FI3

40) chain D
residue 111
type BINDING
sequence T
description in other chain
source Swiss-Prot : SWS_FT_FI3

41) chain D
residue 241
type BINDING
sequence Q
description in other chain
source Swiss-Prot : SWS_FT_FI3

42) chain D
residue 329
type BINDING
sequence R
description in other chain
source Swiss-Prot : SWS_FT_FI3

43) chain D
residue 334
type BINDING
sequence S
description in other chain
source Swiss-Prot : SWS_FT_FI3

44) chain D
residue 338
type BINDING
sequence R
description in other chain
source Swiss-Prot : SWS_FT_FI3


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