eF-site ID 2vd6-A
PDB Code 2vd6
Chain A

click to enlarge
Title Human adenylosuccinate lyase in complex with its substrate N6-(1,2- Dicarboxyethyl)-AMP, and its products AMP and fumarate.
Classification LYASE
Compound ADENYLOSUCCINATE LYASE
Source Homo sapiens (Human) (PUR8_HUMAN)
Sequence A:  GDHGSPDSYRSPLASRYASPEMCFVFSDRYKFRTWRQLWL
WLAEAEQTLGLPITDEQIQEMKSNLENIDFKMAAEEEKRL
RHDVMAHVHTFGHCCPKAAGIIHLGATSCYVGDNTDLIIL
RNALDLLLPKLARVISRLADFAKERASLPTLGFTHFQPAQ
LTTVGKRCCLWIQDLCMDLQNLKRVRDDLRFRGVKGTTGT
QASFLQLFEGDDHKVEQLDKMVTEKAGFKRAFIITGQTYT
RKVDIEVLSVLASLGASVHKICTDIRLLANLKEMEEPFEP
YKRNPMRSERCCSLARHLMTLVMDPLQTASVQWFERTLDD
SANRRICLAEAFLTADTILNTLQNISEGLVVYPKVIERRI
RQELPFMATENIIMAMVKAGGSRQDCHEKIRVLSQQAASV
VKQEGGDNDLIERIQVDAYFSPIHSQLDHLLDPSSFTGRA
SQQVQRFLEEEVYPLLKPYES
Description


Functional site

1) chain A
residue 85
type
sequence R
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

2) chain A
residue 86
type
sequence H
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

3) chain A
residue 87
type
sequence D
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

4) chain A
residue 112
type
sequence S
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

5) chain A
residue 241
type
sequence Q
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

6) chain A
residue 329
type
sequence R
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

7) chain A
residue 331
type
sequence L
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

8) chain A
residue 334
type
sequence S
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

9) chain A
residue 335
type
sequence A
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

10) chain A
residue 338
type
sequence R
description BINDING SITE FOR RESIDUE AMP A 1000
source : AC1

11) chain A
residue 86
type
sequence H
description BINDING SITE FOR RESIDUE FUM A 1001
source : AC2

12) chain A
residue 89
type
sequence M
description BINDING SITE FOR RESIDUE FUM A 1001
source : AC2

13) chain A
residue 111
type
sequence T
description BINDING SITE FOR RESIDUE FUM A 1001
source : AC2

14) chain A
residue 112
type
sequence S
description BINDING SITE FOR RESIDUE FUM A 1001
source : AC2

15) chain A
residue 241
type
sequence Q
description BINDING SITE FOR RESIDUE FUM A 1001
source : AC2

16) chain A
residue 35
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 1003
source : AC3

17) chain A
residue 39
type
sequence W
description BINDING SITE FOR RESIDUE GOL A 1003
source : AC3

18) chain A
residue 87
type
sequence D
description BINDING SITE FOR RESIDUE GOL A 1003
source : AC3

19) chain A
residue 116
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 1003
source : AC3

20) chain A
residue 120
type
sequence D
description BINDING SITE FOR RESIDUE GOL A 1003
source : AC3

21) chain A
residue 334
type
sequence S
description BINDING SITE FOR RESIDUE GOL A 1003
source : AC3

22) chain A
residue 338
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 1003
source : AC3

23) chain A
residue 111
type
sequence T
description BINDING SITE FOR RESIDUE CL A 2002
source : AC5

24) chain A
residue 114
type
sequence Y
description BINDING SITE FOR RESIDUE CL A 2002
source : AC5

25) chain A
residue 196
type
sequence R
description BINDING SITE FOR RESIDUE CL A 2002
source : AC5

26) chain A
residue 199
type
sequence K
description BINDING SITE FOR RESIDUE CL A 2002
source : AC5

27) chain A
residue 200
type
sequence G
description BINDING SITE FOR RESIDUE CL A 2002
source : AC5

28) chain A
residue 158
type
sequence T
description BINDING SITE FOR RESIDUE 2SA B 1002
source : AC6

29) chain A
residue 159
type
sequence H
description BINDING SITE FOR RESIDUE 2SA B 1002
source : AC6

30) chain A
residue 20
type
sequence R
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

31) chain A
residue 21
type
sequence Y
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

32) chain A
residue 295
type
sequence K
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

33) chain A
residue 299
type
sequence M
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

34) chain A
residue 303
type
sequence R
description BINDING SITE FOR RESIDUE 2SA D 1002
source : BC6

35) chain A
residue 297
type
sequence N
description BINDING SITE FOR RESIDUE CL D 2001
source : BC8

36) chain A
residue 299
type
sequence M
description BINDING SITE FOR RESIDUE CL D 2001
source : BC8

37) chain A
residue 159
type ACT_SITE
sequence H
description Proton donor/acceptor => ECO:0000269|PubMed:22812634
source Swiss-Prot : SWS_FT_FI1

38) chain A
residue 147
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI5

39) chain A
residue 295
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI5

40) chain A
residue 415
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1) => ECO:0007744|PubMed:25114211
source Swiss-Prot : SWS_FT_FI6

41) chain A
residue 20
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

42) chain A
residue 303
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

43) chain A
residue 85
type BINDING
sequence R
description in other chain
source Swiss-Prot : SWS_FT_FI3

44) chain A
residue 111
type BINDING
sequence T
description in other chain
source Swiss-Prot : SWS_FT_FI3

45) chain A
residue 334
type BINDING
sequence S
description in other chain
source Swiss-Prot : SWS_FT_FI3

46) chain A
residue 338
type BINDING
sequence R
description in other chain
source Swiss-Prot : SWS_FT_FI3

47) chain A
residue 241
type BINDING
sequence Q
description in other chain
source Swiss-Prot : SWS_FT_FI3

48) chain A
residue 329
type BINDING
sequence R
description in other chain
source Swiss-Prot : SWS_FT_FI3


Display surface

Download
Links