eF-site ID 2vc9-A PDB Code 2vc9 Chain A click to enlarge Title Family 89 Glycoside Hydrolase from Clostridium perfringens in complex with 2-acetamido-1,2-dideoxynojirmycin Classification HYDROLASE Compound ALPHA-N-ACETYLGLUCOSAMINIDASE Source Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) (Q0TST1_CLOP1) Sequence A:  GVEITEGVTVTAKGNTEGNTADLAIDGDLSTYWESSNDYK WIEVDLGGIYELSKIEIFNKDEAVYKYNIYASEDGENFNK IAYKNNDNVSDSNGNMHTIDNVRAGKIRIDVVQNSNSDRV NIAEINVFGKNTGESLPEVKKIATSNFSETPWATEYEKFN SDSAYANEKTLNEIKNLVGRVIGREFKDKFIFEIRDQLNG NDVFEVSDSGDGKVLIKGNNGVSLASGFNYYLKNYCNVSY NPIMGSNLKMPETMPSVGERVVIDTPYEHRYALNFCTYSY TMSFWDWDQYEEFLDWCAMNGVNLVLDIIGQEEVLRRTLN EFGYSDEEVKEFISGPAYFAWFYMQNMTGFGGPLPNDWFE QRAELGRKMHDRMQSFGINPVLQGYSGMVPRDFKEKNQEA QTISQGGWCGFDRPDMLKTYVNEGEADYFQKVADVFYEKQ KEVFGDVTNFYGVDPFHEGGNTGDLDNGKIYEIIQNKMIE HDNDAVWVIQNWQGNPSNNKLEGLTKKDQAMVLDLFSEVS PDWNRLEERDLPWIWNMLHNFGGRMGMDAAPEKLATEIPK ALANSEHMVGIGITPEAINTNPLAYELLFDMAWTRDQINF RTWTEDYIERRYGKTNKEILEAWNIILDTAYKKRNDYYQG AAESIINARPGFGIKSASTWGHSKIVYDKSEFEKAIEIFA KNYDEFKDSDAFLYDFADILKQLLANSAQEYYEVMCNAYN NGNGEKFKFVSGKFLELIKLQERVLSTRPEFLIGNWIEDA RTMLKDSDDWTKDLFEFNARALVTTWGSRNNADGGGLKDY SNRQWSGLTEDYYYARWEKWINGLQAELDGGAKAPNIDWF KMEYDWVNKKSDTDKLYPTEASNENLGELAKIAMESYSVT NMDK Description Functional site 1) chain A residue 299 type sequence N description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 2) chain A residue 301 type sequence C description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 3) chain A residue 305 type sequence Y description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 4) chain A residue 366 type sequence W description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 5) chain A residue 369 type sequence M description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 6) chain A residue 482 type sequence H description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 7) chain A residue 483 type sequence E description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 8) chain A residue 517 type sequence W description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 9) chain A residue 601 type sequence E description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 10) chain A residue 822 type sequence L description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 11) chain A residue 825 type sequence Y description BINDING SITE FOR RESIDUE NOK A1909 source : AC1 12) chain A residue 481 type sequence F description BINDING SITE FOR RESIDUE GOL A1910 source : AC2 13) chain A residue 487 type sequence T description BINDING SITE FOR RESIDUE GOL A1910 source : AC2 14) chain A residue 520 type sequence N description BINDING SITE FOR RESIDUE GOL A1910 source : AC2 15) chain A residue 525 type sequence K description BINDING SITE FOR RESIDUE GOL A1910 source : AC2 16) chain A residue 433 type sequence W description BINDING SITE FOR RESIDUE GOL A1911 source : AC3 17) chain A residue 483 type sequence E description BINDING SITE FOR RESIDUE GOL A1911 source : AC3 18) chain A residue 685 type sequence W description BINDING SITE FOR RESIDUE GOL A1911 source : AC3 19) chain A residue 48 type sequence L description BINDING SITE FOR RESIDUE CA A1912 source : AC4 20) chain A residue 51 type sequence D description BINDING SITE FOR RESIDUE CA A1912 source : AC4 21) chain A residue 53 type sequence D description BINDING SITE FOR RESIDUE CA A1912 source : AC4 22) chain A residue 56 type sequence T description BINDING SITE FOR RESIDUE CA A1912 source : AC4 23) chain A residue 148 type sequence A description BINDING SITE FOR RESIDUE CA A1912 source : AC4 24) chain A residue 149 type sequence E description BINDING SITE FOR RESIDUE CA A1912 source : AC4

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