eF-site ID 2vc9-A
PDB Code 2vc9
Chain A

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Title Family 89 Glycoside Hydrolase from Clostridium perfringens in complex with 2-acetamido-1,2-dideoxynojirmycin
Classification HYDROLASE
Compound ALPHA-N-ACETYLGLUCOSAMINIDASE
Source Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) (Q0TST1_CLOP1)
Sequence A:  GVEITEGVTVTAKGNTEGNTADLAIDGDLSTYWESSNDYK
WIEVDLGGIYELSKIEIFNKDEAVYKYNIYASEDGENFNK
IAYKNNDNVSDSNGNMHTIDNVRAGKIRIDVVQNSNSDRV
NIAEINVFGKNTGESLPEVKKIATSNFSETPWATEYEKFN
SDSAYANEKTLNEIKNLVGRVIGREFKDKFIFEIRDQLNG
NDVFEVSDSGDGKVLIKGNNGVSLASGFNYYLKNYCNVSY
NPIMGSNLKMPETMPSVGERVVIDTPYEHRYALNFCTYSY
TMSFWDWDQYEEFLDWCAMNGVNLVLDIIGQEEVLRRTLN
EFGYSDEEVKEFISGPAYFAWFYMQNMTGFGGPLPNDWFE
QRAELGRKMHDRMQSFGINPVLQGYSGMVPRDFKEKNQEA
QTISQGGWCGFDRPDMLKTYVNEGEADYFQKVADVFYEKQ
KEVFGDVTNFYGVDPFHEGGNTGDLDNGKIYEIIQNKMIE
HDNDAVWVIQNWQGNPSNNKLEGLTKKDQAMVLDLFSEVS
PDWNRLEERDLPWIWNMLHNFGGRMGMDAAPEKLATEIPK
ALANSEHMVGIGITPEAINTNPLAYELLFDMAWTRDQINF
RTWTEDYIERRYGKTNKEILEAWNIILDTAYKKRNDYYQG
AAESIINARPGFGIKSASTWGHSKIVYDKSEFEKAIEIFA
KNYDEFKDSDAFLYDFADILKQLLANSAQEYYEVMCNAYN
NGNGEKFKFVSGKFLELIKLQERVLSTRPEFLIGNWIEDA
RTMLKDSDDWTKDLFEFNARALVTTWGSRNNADGGGLKDY
SNRQWSGLTEDYYYARWEKWINGLQAELDGGAKAPNIDWF
KMEYDWVNKKSDTDKLYPTEASNENLGELAKIAMESYSVT
NMDK
Description


Functional site

1) chain A
residue 299
type
sequence N
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

2) chain A
residue 301
type
sequence C
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

3) chain A
residue 305
type
sequence Y
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

4) chain A
residue 366
type
sequence W
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

5) chain A
residue 369
type
sequence M
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

6) chain A
residue 482
type
sequence H
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

7) chain A
residue 483
type
sequence E
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

8) chain A
residue 517
type
sequence W
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

9) chain A
residue 601
type
sequence E
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

10) chain A
residue 822
type
sequence L
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

11) chain A
residue 825
type
sequence Y
description BINDING SITE FOR RESIDUE NOK A1909
source : AC1

12) chain A
residue 481
type
sequence F
description BINDING SITE FOR RESIDUE GOL A1910
source : AC2

13) chain A
residue 487
type
sequence T
description BINDING SITE FOR RESIDUE GOL A1910
source : AC2

14) chain A
residue 520
type
sequence N
description BINDING SITE FOR RESIDUE GOL A1910
source : AC2

15) chain A
residue 525
type
sequence K
description BINDING SITE FOR RESIDUE GOL A1910
source : AC2

16) chain A
residue 433
type
sequence W
description BINDING SITE FOR RESIDUE GOL A1911
source : AC3

17) chain A
residue 483
type
sequence E
description BINDING SITE FOR RESIDUE GOL A1911
source : AC3

18) chain A
residue 685
type
sequence W
description BINDING SITE FOR RESIDUE GOL A1911
source : AC3

19) chain A
residue 48
type
sequence L
description BINDING SITE FOR RESIDUE CA A1912
source : AC4

20) chain A
residue 51
type
sequence D
description BINDING SITE FOR RESIDUE CA A1912
source : AC4

21) chain A
residue 53
type
sequence D
description BINDING SITE FOR RESIDUE CA A1912
source : AC4

22) chain A
residue 56
type
sequence T
description BINDING SITE FOR RESIDUE CA A1912
source : AC4

23) chain A
residue 148
type
sequence A
description BINDING SITE FOR RESIDUE CA A1912
source : AC4

24) chain A
residue 149
type
sequence E
description BINDING SITE FOR RESIDUE CA A1912
source : AC4


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