|
|
eF-site ID
|
2v83-D |
|
PDB Code
|
2v83 |
|
Chain
|
D |
|
click to enlarge
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Title
|
Crystal structure of RAG2-PHD finger in complex with H3K4me3 peptide |
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Classification
|
PROTEIN BINDING |
|
Compound
|
VDJ RECOMBINATION-ACTIVATING PROTEIN 2 |
|
Source
|
(Q5TEC6_HUMAN) |
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Sequence
|
D: |
ARTXQTARK
|
|
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Description
|
(1) |
VDJ RECOMBINATION-ACTIVATING PROTEIN 2, HISTONE H3
|
|
Functional site
|
|
|
1)
|
chain |
D |
| residue |
9 |
| type |
MOD_RES |
| sequence |
K
|
| description |
N6-methyllysine; alternate => ECO:0000269|PubMed:11242053, ECO:0000269|PubMed:16185088, ECO:0000269|PubMed:16267050, ECO:0000269|PubMed:16457588, ECO:0000269|PubMed:17194708
|
| source |
Swiss-Prot : SWS_FT_FI7
|
|
|
2)
|
chain |
D |
| residue |
2 |
| type |
MOD_RES |
| sequence |
R
|
| description |
Citrulline; alternate => ECO:0000269|PubMed:16567635
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
3)
|
chain |
D |
| residue |
3 |
| type |
MOD_RES |
| sequence |
T
|
| description |
Phosphothreonine; by HASPIN => ECO:0000269|PubMed:15681610, ECO:0000269|PubMed:16185088
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
4)
|
chain |
D |
| residue |
4 |
| type |
MOD_RES |
| sequence |
X
|
| description |
N6-methyllysine; alternate => ECO:0000269|PubMed:16267050, ECO:0000269|PubMed:16457588, ECO:0000269|PubMed:17194708
|
| source |
Swiss-Prot : SWS_FT_FI3
|
|
|
5)
|
chain |
D |
| residue |
5 |
| type |
MOD_RES |
| sequence |
Q
|
| description |
5-glutamyl serotonin; alternate => ECO:0000269|PubMed:30867594
|
| source |
Swiss-Prot : SWS_FT_FI4
|
|
|
6)
|
chain |
D |
| residue |
6 |
| type |
MOD_RES |
| sequence |
T
|
| description |
Phosphothreonine; by PKC => ECO:0000269|PubMed:20228790
|
| source |
Swiss-Prot : SWS_FT_FI5
|
|
|
7)
|
chain |
D |
| residue |
8 |
| type |
MOD_RES |
| sequence |
R
|
| description |
Symmetric dimethylarginine; by PRMT5; alternate => ECO:0000250|UniProtKB:P68433
|
| source |
Swiss-Prot : SWS_FT_FI6
|
|
|
|