eF-site ID 2v4q-APT
PDB Code 2v4q
Chain A, P, T

click to enlarge
Title Post-insertion complex of the Y-family DNA polymerase Dpo4 with M1dG containing template DNA
Classification TRANSFERASE
Compound DNA POLYMERASE IV
Source Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (2V4Q)
Sequence A:  MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDS
GAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV
YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYRE
AYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP
NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGIN
KLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR
VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRI
PKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ
KILEEDERKIRRIGVRFSKFIE
P:  GGGGGAAGGATTCC
T:  CACXGAATCCTTCCCCC
Description


Functional site

1) chain A
residue 7
type
sequence D
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

2) chain A
residue 8
type
sequence F
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

3) chain A
residue 9
type
sequence D
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

4) chain A
residue 10
type
sequence Y
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

5) chain A
residue 11
type
sequence F
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

6) chain A
residue 12
type
sequence Y
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

7) chain A
residue 44
type
sequence A
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

8) chain A
residue 45
type
sequence T
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

9) chain A
residue 48
type
sequence Y
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

10) chain A
residue 51
type
sequence R
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

11) chain A
residue 105
type
sequence D
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

12) chain A
residue 159
type
sequence K
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

13) chain P
residue 14
type
sequence C
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

14) chain T
residue 4
type
sequence C
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

15) chain T
residue 5
type
sequence X
description BINDING SITE FOR RESIDUE DGT A 594
source : AC1

16) chain A
residue 7
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1000
source : AC2

17) chain A
residue 8
type
sequence F
description BINDING SITE FOR RESIDUE CA A 1000
source : AC2

18) chain A
residue 105
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1000
source : AC2

19) chain A
residue 7
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1001
source : AC3

20) chain A
residue 105
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1001
source : AC3

21) chain A
residue 106
type
sequence E
description BINDING SITE FOR RESIDUE CA A 1001
source : AC3

22) chain A
residue 181
type
sequence A
description BINDING SITE FOR RESIDUE CA A 1002
source : AC4

23) chain A
residue 186
type
sequence I
description BINDING SITE FOR RESIDUE CA A 1002
source : AC4

24) chain A
residue 106
type ACT_SITE
sequence E
description
source Swiss-Prot : SWS_FT_FI1

25) chain A
residue 12
type SITE
sequence Y
description Substrate discrimination
source Swiss-Prot : SWS_FT_FI3

26) chain A
residue 7
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

27) chain A
residue 105
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links