eF-site ID 2uxn-A
PDB Code 2uxn
Chain A

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Title Structural Basis of Histone Demethylation by LSD1 Revealed by Suicide Inactivation
Classification OXIDOREDUCTASE/TRANSCRIPTION REGULATOR
Compound LYSINE-SPECIFIC HISTONE DEMETHYLASE 1
Source Homo sapiens (Human) (H31_HUMAN)
Sequence A:  GVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLF
IRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLVHRV
HSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLA
AARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAM
VVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPK
EKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQAL
EVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLK
EKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCK
EYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWH
FANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYS
CVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQ
TFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQ
RMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELF
LFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILK
GIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGND
YDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVH
GALLSGLREAGRIADQFLGAMYTL
Description (1)  LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (E.C.1.-.-.-), REST COREPRESSOR 1, HISTONE H3.1


Functional site

1) chain A
residue 754
type
sequence D
description BINDING SITE FOR RESIDUE CL A1839
source : AC1

2) chain A
residue 285
type
sequence G
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

3) chain A
residue 287
type
sequence G
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

4) chain A
residue 288
type
sequence V
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

5) chain A
residue 289
type
sequence S
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

6) chain A
residue 307
type
sequence L
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

7) chain A
residue 308
type
sequence E
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

8) chain A
residue 309
type
sequence A
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

9) chain A
residue 310
type
sequence R
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

10) chain A
residue 314
type
sequence G
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

11) chain A
residue 315
type
sequence G
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

12) chain A
residue 316
type
sequence R
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

13) chain A
residue 317
type
sequence V
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

14) chain A
residue 329
type
sequence L
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

15) chain A
residue 330
type
sequence G
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

16) chain A
residue 331
type
sequence A
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

17) chain A
residue 332
type
sequence M
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

18) chain A
residue 333
type
sequence V
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

19) chain A
residue 588
type
sequence T
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

20) chain A
residue 590
type
sequence V
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

21) chain A
residue 624
type
sequence T
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

22) chain A
residue 625
type
sequence L
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

23) chain A
residue 626
type
sequence P
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

24) chain A
residue 751
type
sequence W
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

25) chain A
residue 756
type
sequence W
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

26) chain A
residue 760
type
sequence S
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

27) chain A
residue 761
type
sequence Y
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

28) chain A
residue 800
type
sequence G
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

29) chain A
residue 801
type
sequence E
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

30) chain A
residue 809
type
sequence A
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

31) chain A
residue 810
type
sequence T
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

32) chain A
residue 811
type
sequence V
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

33) chain A
residue 814
type
sequence A
description BINDING SITE FOR RESIDUE FDA A 900
source : AC2

34) chain A
residue 526
type
sequence R
description BINDING SITE FOR RESIDUE GOL A1837
source : AC3

35) chain A
residue 688
type
sequence R
description BINDING SITE FOR RESIDUE GOL A1837
source : AC3

36) chain A
residue 469
type MOD_RES
sequence K
description N6-methyllysine; alternate => ECO:0000269|PubMed:16267050, ECO:0000269|PubMed:16457588, ECO:0000269|PubMed:17194708
source Swiss-Prot : SWS_FT_FI3

37) chain A
residue 503
type MOD_RES
sequence K
description 5-glutamyl serotonin; alternate => ECO:0000269|PubMed:30867594
source Swiss-Prot : SWS_FT_FI4

38) chain A
residue 308
type MOD_RES
sequence E
description Citrulline; alternate => ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1

39) chain A
residue 310
type MOD_RES
sequence R
description Citrulline; alternate => ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1

40) chain A
residue 316
type MOD_RES
sequence R
description Citrulline; alternate => ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1

41) chain A
residue 332
type MOD_RES
sequence M
description Citrulline; alternate => ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1

42) chain A
residue 801
type MOD_RES
sequence E
description Citrulline; alternate => ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1

43) chain A
residue 810
type MOD_RES
sequence T
description Citrulline; alternate => ECO:0000269|PubMed:16567635
source Swiss-Prot : SWS_FT_FI1


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