eF-site ID 2uua-Q
PDB Code 2uua
Chain Q

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Title Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin.
Classification RIBOSOME
Compound 16S RRNA
Source ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS;
Sequence Q:  PKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKK
YLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLVESGR
MDLVEKYLIRRQNYESLSKRGGKA
Description


Functional site

1) chain Q
residue 32
type
sequence Y
description binding site for residue MG A 1723
source : AM9

2) chain Q
residue 39
type
sequence S
description binding site for residue MG A 1739
source : AO7

3) chain Q
residue 65
type
sequence I
description binding site for residue MG A 1782
source : AT5

4) chain Q
residue 13
type
sequence D
description binding site for residue MG Q 201
source : AU8

5) chain Q
residue 15
type
sequence M
description binding site for residue MG Q 201
source : AU8

6) chain Q
residue 49
type
sequence E
description binding site for residue MG Q 201
source : AU8

7) chain Q
residue 54-66
type prosite
sequence GDVVEIIESRPIS
description RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIiEsRPIS
source prosite : PS00056


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