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eF-site ID
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2uua-B |
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PDB Code
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2uua |
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Chain
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B |
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click to enlarge
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Title
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Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin. |
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Classification
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RIBOSOME |
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Compound
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16S RRNA |
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Source
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ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; |
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Sequence
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B: |
VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQK
TMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAE
RAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPE
IEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVD
PTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDD
AIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQE
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Description
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Functional site
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1)
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chain |
B |
| residue |
20 |
| type |
|
| sequence |
E
|
| description |
binding site for residue MG B 301
|
| source |
: AT7
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2)
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chain |
B |
| residue |
166 |
| type |
|
| sequence |
D
|
| description |
binding site for residue MG B 301
|
| source |
: AT7
|
|
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3)
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chain |
B |
| residue |
189 |
| type |
|
| sequence |
D
|
| description |
binding site for residue MG B 301
|
| source |
: AT7
|
|
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4)
|
chain |
B |
| residue |
191 |
| type |
|
| sequence |
D
|
| description |
binding site for residue MG B 301
|
| source |
: AT7
|
|
|
5)
|
chain |
B |
| residue |
205 |
| type |
|
| sequence |
D
|
| description |
binding site for residue MG B 301
|
| source |
: AT7
|
|
|
6)
|
chain |
B |
| residue |
7-18 |
| type |
prosite |
| sequence |
VKELLEAGVHFG
|
| description |
RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VkELLEAGVHFG
|
| source |
prosite : PS00962
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