eF-site ID 2tmd-B
PDB Code 2tmd
Chain B

click to enlarge
Title CORRELATION OF X-RAY DEDUCED AND EXPERIMENTAL AMINO ACID SEQUENCES OF TRIMETHYLAMINE DEHYDROGENASE
Classification OXIDOREDUCTASE
Compound TRIMETHYLAMINE DEHYDROGENASE
Source Methylophilus methylotrophus (Bacterium W3A1) (DHTM_METME)
Sequence B:  ARDPKHDILFEPIQIGPKTLRNRFYQVPHCIGAGSDKPGF
QSAHRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDE
GDVRNLKAMTDEVHKYGALAGVELWYGGAHAPNMESRATP
RGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRD
AGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRAR
FWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDG
QKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTI
PWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGC
ARPSIADPFLPQKVEQGRYDDIRVCIGCNVCISRWEIGGP
PMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPS
GSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEW
SYHRDYRETQITKLLKKNKESQLALGQKPMTADDVLQYGA
DKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQV
MDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVS
GVHLANYMHFTLEYPNMMRRLHELHVEELGDHFCSRIEPG
RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVL
VTGRHSECTLWNELKARESEWAENDIKGIYLIGDAEAPRL
IADATFTGHRVAREIEEANPQIAIPYKRETIAWGTPHMPG
GNFKIEYKV
Description


Functional site

1) chain B
residue 322
type
sequence R
description BINDING SITE FOR RESIDUE SF4 B 801
source : AC4

2) chain B
residue 325
type
sequence I
description BINDING SITE FOR RESIDUE SF4 B 801
source : AC4

3) chain B
residue 345
type
sequence C
description BINDING SITE FOR RESIDUE SF4 B 801
source : AC4

4) chain B
residue 346
type
sequence I
description BINDING SITE FOR RESIDUE SF4 B 801
source : AC4

5) chain B
residue 347
type
sequence G
description BINDING SITE FOR RESIDUE SF4 B 801
source : AC4

6) chain B
residue 348
type
sequence C
description BINDING SITE FOR RESIDUE SF4 B 801
source : AC4

7) chain B
residue 349
type
sequence N
description BINDING SITE FOR RESIDUE SF4 B 801
source : AC4

8) chain B
residue 351
type
sequence C
description BINDING SITE FOR RESIDUE SF4 B 801
source : AC4

9) chain B
residue 364
type
sequence C
description BINDING SITE FOR RESIDUE SF4 B 801
source : AC4

10) chain B
residue 365
type
sequence T
description BINDING SITE FOR RESIDUE SF4 B 801
source : AC4

11) chain B
residue 27
type
sequence V
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

12) chain B
residue 28
type
sequence P
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

13) chain B
residue 29
type
sequence H
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

14) chain B
residue 30
type
sequence C
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

15) chain B
residue 59
type
sequence E
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

16) chain B
residue 60
type
sequence Y
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

17) chain B
residue 103
type
sequence E
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

18) chain B
residue 169
type
sequence Y
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

19) chain B
residue 172
type
sequence H
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

20) chain B
residue 222
type
sequence R
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

21) chain B
residue 264
type
sequence W
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

22) chain B
residue 267
type
sequence D
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

23) chain B
residue 268
type
sequence A
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

24) chain B
residue 297
type
sequence V
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

25) chain B
residue 299
type
sequence R
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

26) chain B
residue 320
type
sequence C
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

27) chain B
residue 321
type
sequence A
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

28) chain B
residue 322
type
sequence R
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

29) chain B
residue 323
type
sequence P
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

30) chain B
residue 352
type
sequence I
description BINDING SITE FOR RESIDUE FMN B 802
source : AC5

31) chain B
residue 396
type
sequence G
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

32) chain B
residue 398
type
sequence G
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

33) chain B
residue 399
type
sequence P
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

34) chain B
residue 400
type
sequence S
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

35) chain B
residue 419
type
sequence D
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

36) chain B
residue 420
type
sequence T
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

37) chain B
residue 426
type
sequence G
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

38) chain B
residue 427
type
sequence H
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

39) chain B
residue 469
type
sequence P
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

40) chain B
residue 470
type
sequence M
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

41) chain B
residue 486
type
sequence A
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

42) chain B
residue 487
type
sequence T
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

43) chain B
residue 488
type
sequence G
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

44) chain B
residue 674
type
sequence D
description BINDING SITE FOR RESIDUE ADP B 803
source : AC6

45) chain B
residue 31
type catalytic
sequence I
description 114
source MCSA : MCSA2

46) chain B
residue 170
type catalytic
sequence G
description 114
source MCSA : MCSA2

47) chain B
residue 173
type catalytic
sequence S
description 114
source MCSA : MCSA2

48) chain B
residue 268
type catalytic
sequence A
description 114
source MCSA : MCSA2

49) chain B
residue 175
type ACT_SITE
sequence L
description Proton donor => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

50) chain B
residue 223
type BINDING
sequence F
description
source Swiss-Prot : SWS_FT_FI2

51) chain B
residue 268
type BINDING
sequence A
description
source Swiss-Prot : SWS_FT_FI2

52) chain B
residue 323
type BINDING
sequence P
description
source Swiss-Prot : SWS_FT_FI2

53) chain B
residue 346
type BINDING
sequence I
description
source Swiss-Prot : SWS_FT_FI2

54) chain B
residue 349
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

55) chain B
residue 352
type BINDING
sequence I
description
source Swiss-Prot : SWS_FT_FI2

56) chain B
residue 365
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI2

57) chain B
residue 104
type BINDING
sequence L
description
source Swiss-Prot : SWS_FT_FI2

58) chain B
residue 170
type BINDING
sequence G
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

59) chain B
residue 392
type BINDING
sequence V
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

60) chain B
residue 31
type MOD_RES
sequence I
description S-6-FMN cysteine
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links