eF-site ID 2rfi-A
PDB Code 2rfi
Chain A

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Title Crystal structure of catalytic domain of human euchromatic histone methyltransferase 1 in complex with SAH and dimethylated H3K9 peptide
Classification TRANSFERASE
Compound Histone-lysine N-methyltransferase, H3 lysine-9 specific 5
Source null (2RFI)
Sequence A:  VERIVSRDIARGYERIPIPCVNAVDSEPCPSNYKYVSQNC
VTSPMNIDRNITHLQYCVCIDDCSSSNCMCGQLSMRCWYD
KDGRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLR
ARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEA
DVREEDSYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEP
NLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGER
FWDIKGKLFSCRCGSPKCRHS
Description


Functional site

1) chain A
residue 1031
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

2) chain A
residue 1044
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

3) chain A
residue 1074
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

4) chain A
residue 1078
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 501
source : AC1

5) chain A
residue 1037
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

6) chain A
residue 1074
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

7) chain A
residue 1080
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

8) chain A
residue 1084
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 502
source : AC2

9) chain A
residue 1031
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 503
source : AC3

10) chain A
residue 1033
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 503
source : AC3

11) chain A
residue 1037
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 503
source : AC3

12) chain A
residue 1042
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 503
source : AC3

13) chain A
residue 1172
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 504
source : AC4

14) chain A
residue 1225
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 504
source : AC4

15) chain A
residue 1227
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 504
source : AC4

16) chain A
residue 1232
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 504
source : AC4

17) chain A
residue 1105
type
sequence M
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

18) chain A
residue 1107
type
sequence W
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

19) chain A
residue 1141
type
sequence S
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

20) chain A
residue 1142
type
sequence Y
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

21) chain A
residue 1166
type
sequence R
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

22) chain A
residue 1167
type
sequence F
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

23) chain A
residue 1169
type
sequence N
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

24) chain A
residue 1170
type
sequence H
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

25) chain A
residue 1211
type
sequence Y
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

26) chain A
residue 1215
type
sequence F
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

27) chain A
residue 1223
type
sequence F
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

28) chain A
residue 1225
type
sequence C
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

29) chain A
residue 1226
type
sequence R
description BINDING SITE FOR RESIDUE SAH A 101
source : AC9

30) chain A
residue 1062
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

31) chain A
residue 1064
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

32) chain A
residue 1068
type BINDING
sequence P
description
source Swiss-Prot : SWS_FT_FI1

33) chain A
residue 1073
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

34) chain A
residue 1075
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

35) chain A
residue 1105
type BINDING
sequence M
description
source Swiss-Prot : SWS_FT_FI1

36) chain A
residue 1136
type BINDING
sequence V
description
source Swiss-Prot : SWS_FT_FI1

37) chain A
residue 1173
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

38) chain A
residue 1200
type BINDING
sequence L
description
source Swiss-Prot : SWS_FT_FI1

39) chain A
residue 1203
type BINDING
sequence A
description
source Swiss-Prot : SWS_FT_FI1

40) chain A
residue 1109
type BINDING
sequence V
description
source Swiss-Prot : SWS_FT_FI1

41) chain A
residue 1111
type BINDING
sequence S
description
source Swiss-Prot : SWS_FT_FI1

42) chain A
residue 1115
type BINDING
sequence I
description
source Swiss-Prot : SWS_FT_FI1

43) chain A
residue 1155
type SITE
sequence C
description Histone H3K9me binding => ECO:0000269|PubMed:18264113, ECO:0000269|PubMed:20084102
source Swiss-Prot : SWS_FT_FI2

44) chain A
residue 1004
type MOD_RES
sequence P
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI3

45) chain A
residue 1048
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI3


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