eF-site ID 2rex-D
PDB Code 2rex
Chain D

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Title Crystal structure of the effector domain of PLXNB1 bound with Rnd1 GTPase
Classification SIGNALING PROTEIN/LIPOPROTEIN
Compound Plexin-B1
Source Homo sapiens (Human) (RND1_HUMAN)
Sequence D:  PQPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTV
FENYTACLETEEQRVELSLWDTSGSPYYDNVRPLCYSDSD
AVLLCFDISRPETVALKKWRTEILDYCPSTRVLLIGCKTD
LRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGS
AFTSEKSIHSIFRTASMLCL
Description


Functional site

1) chain D
residue 27
type
sequence T
description BINDING SITE FOR RESIDUE MG D 550
source : AC3

2) chain D
residue 45
type
sequence T
description BINDING SITE FOR RESIDUE MG D 550
source : AC3

3) chain D
residue 38
type
sequence Y
description BINDING SITE FOR RESIDUE CA D 551
source : AC4

4) chain D
residue 40
type
sequence E
description BINDING SITE FOR RESIDUE CA D 551
source : AC4

5) chain D
residue 22
type
sequence V
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

6) chain D
residue 23
type
sequence Q
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

7) chain D
residue 24
type
sequence C
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

8) chain D
residue 25
type
sequence G
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

9) chain D
residue 26
type
sequence K
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

10) chain D
residue 27
type
sequence T
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

11) chain D
residue 28
type
sequence A
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

12) chain D
residue 38
type
sequence Y
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

13) chain D
residue 39
type
sequence P
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

14) chain D
residue 40
type
sequence E
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

15) chain D
residue 41
type
sequence T
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

16) chain D
residue 42
type
sequence Y
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

17) chain D
residue 45
type
sequence T
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

18) chain D
residue 68
type
sequence T
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

19) chain D
residue 70
type
sequence G
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

20) chain D
residue 126
type
sequence K
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

21) chain D
residue 128
type
sequence D
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

22) chain D
residue 129
type
sequence L
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

23) chain D
residue 169
type
sequence A
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

24) chain D
residue 170
type
sequence F
description BINDING SITE FOR RESIDUE GNP D 500
source : AC6

25) chain D
residue 23
type
sequence Q
description BINDING SITE FOR RESIDUE UNX D 553
source : BC6

26) chain D
residue 46
type
sequence V
description BINDING SITE FOR RESIDUE UNX D 554
source : CC6

27) chain D
residue 38
type
sequence Y
description BINDING SITE FOR RESIDUE UNX D 556
source : CC8

28) chain D
residue 49
type
sequence N
description BINDING SITE FOR RESIDUE UNX D 559
source : CC9

29) chain D
residue 51
type
sequence T
description BINDING SITE FOR RESIDUE UNX D 559
source : CC9

30) chain D
residue 49
type
sequence N
description BINDING SITE FOR RESIDUE UNX D 560
source : DC1

31) chain D
residue 148
type
sequence S
description BINDING SITE FOR RESIDUE UNX D 561
source : DC3

32) chain D
residue 149
type
sequence Y
description BINDING SITE FOR RESIDUE UNX D 561
source : DC3

33) chain D
residue 169
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS
source Swiss-Prot : SWS_FT_FI1

34) chain D
residue 23
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS
source Swiss-Prot : SWS_FT_FI1

35) chain D
residue 38
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS
source Swiss-Prot : SWS_FT_FI1

36) chain D
residue 67
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS
source Swiss-Prot : SWS_FT_FI1

37) chain D
residue 125
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS
source Swiss-Prot : SWS_FT_FI1


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