eF-site ID 2rex-ABCD PDB Code 2rex Chain A, B, C, D click to enlarge Title Crystal structure of the effector domain of PLXNB1 bound with Rnd1 GTPase Classification SIGNALING PROTEIN/LIPOPROTEIN Compound Plexin-B1 Source null (RND1_HUMAN) Sequence A:  YRPLTLNALLAVGPGAGEAQGVPVKVLDCDTISQAKEKML DQLYKGVPLTQRPDPRTLDVEWRSGVAGHLILSDEDVTSE VQGLWRRLNTLQHYKVPDGATVALVPC B:  RCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTA CLEQRVELSLWDTSGSPYYDNVRPLCYSDSDAVLLCFDIS RPETVALKKWRTEILDYCPSTRVLLIGCKTDLRTDLSTLM ELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIH SIFRTASMLCL C:  YRPLTLNALLAVGPGAGEAQGVPVKVLDCDTISQAKEKML DQLYKGVPLTQRPDPRTLDVEWRSGVAGHLILSDEDVTSE VQGLWRRLNTLQHYKVPDGATVALVPC D:  PQPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTV FENYTACLETEEQRVELSLWDTSGSPYYDNVRPLCYSDSD AVLLCFDISRPETVALKKWRTEILDYCPSTRVLLIGCKTD LRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGS AFTSEKSIHSIFRTASMLCL Description Functional site 1) chain B residue 27 type sequence T description BINDING SITE FOR RESIDUE MG B 550 source : AC1 2) chain B residue 45 type sequence T description BINDING SITE FOR RESIDUE MG B 550 source : AC1 3) chain B residue 38 type sequence Y description BINDING SITE FOR RESIDUE CA B 551 source : AC2 4) chain B residue 40 type sequence E description BINDING SITE FOR RESIDUE CA B 551 source : AC2 5) chain C residue 1763 type sequence E description BINDING SITE FOR RESIDUE CA B 551 source : AC2 6) chain D residue 27 type sequence T description BINDING SITE FOR RESIDUE MG D 550 source : AC3 7) chain D residue 45 type sequence T description BINDING SITE FOR RESIDUE MG D 550 source : AC3 8) chain A residue 1763 type sequence E description BINDING SITE FOR RESIDUE CA D 551 source : AC4 9) chain D residue 38 type sequence Y description BINDING SITE FOR RESIDUE CA D 551 source : AC4 10) chain D residue 40 type sequence E description BINDING SITE FOR RESIDUE CA D 551 source : AC4 11) chain B residue 22 type sequence V description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 12) chain B residue 23 type sequence Q description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 13) chain B residue 24 type sequence C description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 14) chain B residue 25 type sequence G description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 15) chain B residue 26 type sequence K description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 16) chain B residue 27 type sequence T description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 17) chain B residue 28 type sequence A description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 18) chain B residue 38 type sequence Y description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 19) chain B residue 39 type sequence P description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 20) chain B residue 40 type sequence E description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 21) chain B residue 41 type sequence T description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 22) chain B residue 42 type sequence Y description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 23) chain B residue 45 type sequence T description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 24) chain B residue 68 type sequence T description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 25) chain B residue 69 type sequence S description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 26) chain B residue 70 type sequence G description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 27) chain B residue 126 type sequence K description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 28) chain B residue 128 type sequence D description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 29) chain B residue 129 type sequence L description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 30) chain B residue 168 type sequence S description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 31) chain B residue 169 type sequence A description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 32) chain B residue 170 type sequence F description BINDING SITE FOR RESIDUE GNP B 500 source : AC5 33) chain D residue 22 type sequence V description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 34) chain D residue 23 type sequence Q description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 35) chain D residue 24 type sequence C description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 36) chain D residue 25 type sequence G description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 37) chain D residue 26 type sequence K description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 38) chain D residue 27 type sequence T description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 39) chain D residue 28 type sequence A description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 40) chain D residue 38 type sequence Y description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 41) chain D residue 39 type sequence P description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 42) chain D residue 40 type sequence E description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 43) chain D residue 41 type sequence T description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 44) chain D residue 42 type sequence Y description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 45) chain D residue 45 type sequence T description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 46) chain D residue 68 type sequence T description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 47) chain D residue 70 type sequence G description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 48) chain D residue 126 type sequence K description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 49) chain D residue 128 type sequence D description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 50) chain D residue 129 type sequence L description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 51) chain D residue 169 type sequence A description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 52) chain D residue 170 type sequence F description BINDING SITE FOR RESIDUE GNP D 500 source : AC6 53) chain A residue 1762 type sequence G description BINDING SITE FOR RESIDUE UNX A 1 source : AC7 54) chain A residue 1763 type sequence E description BINDING SITE FOR RESIDUE UNX A 1 source : AC7 55) chain A residue 1811 type sequence V description BINDING SITE FOR RESIDUE UNX A 1 source : AC7 56) chain B residue 36 type sequence D description BINDING SITE FOR RESIDUE UNX C 2 source : AC8 57) chain C residue 1762 type sequence G description BINDING SITE FOR RESIDUE UNX C 2 source : AC8 58) chain C residue 1763 type sequence E description BINDING SITE FOR RESIDUE UNX C 2 source : AC8 59) chain C residue 1816 type sequence I description BINDING SITE FOR RESIDUE UNX C 3 source : AC9 60) chain B residue 45 type sequence T description BINDING SITE FOR RESIDUE UNX B 552 source : BC1 61) chain B residue 46 type sequence V description BINDING SITE FOR RESIDUE UNX B 552 source : BC1 62) chain A residue 1815 type sequence L description BINDING SITE FOR RESIDUE UNX A 5 source : BC2 63) chain A residue 1816 type sequence I description BINDING SITE FOR RESIDUE UNX A 5 source : BC2 64) chain B residue 49 type sequence N description BINDING SITE FOR RESIDUE UNX B 553 source : BC3 65) chain B residue 29 type sequence M description BINDING SITE FOR RESIDUE UNX B 554 source : BC4 66) chain B residue 124 type sequence G description BINDING SITE FOR RESIDUE UNX B 554 source : BC4 67) chain B residue 167 type sequence G description BINDING SITE FOR RESIDUE UNX B 554 source : BC4 68) chain B residue 176 type sequence I description BINDING SITE FOR RESIDUE UNX B 554 source : BC4 69) chain B residue 179 type sequence I description BINDING SITE FOR RESIDUE UNX B 554 source : BC4 70) chain C residue 1777 type sequence I description BINDING SITE FOR RESIDUE UNX C 9 source : BC5 71) chain C residue 1781 type sequence K description BINDING SITE FOR RESIDUE UNX C 9 source : BC5 72) chain D residue 23 type sequence Q description BINDING SITE FOR RESIDUE UNX D 553 source : BC6 73) chain A residue 1781 type sequence K description BINDING SITE FOR RESIDUE UNX A 11 source : BC7 74) chain B residue 23 type sequence Q description BINDING SITE FOR RESIDUE UNX B 555 source : BC8 75) chain B residue 32 type sequence V description BINDING SITE FOR RESIDUE UNX B 556 source : BC9 76) chain B residue 33 type sequence L description BINDING SITE FOR RESIDUE UNX B 556 source : BC9 77) chain B residue 36 type sequence D description BINDING SITE FOR RESIDUE UNX B 556 source : BC9 78) chain B residue 173 type sequence E description BINDING SITE FOR RESIDUE UNX B 556 source : BC9 79) chain B residue 177 type sequence H description BINDING SITE FOR RESIDUE UNX B 556 source : BC9 80) chain B residue 38 type sequence Y description BINDING SITE FOR RESIDUE UNX B 557 source : CC1 81) chain C residue 1844 type sequence G description BINDING SITE FOR RESIDUE UNX B 557 source : CC1 82) chain B residue 74 type sequence Y description BINDING SITE FOR RESIDUE UNX B 558 source : CC2 83) chain B residue 153 type sequence C description BINDING SITE FOR RESIDUE UNX B 559 source : CC3 84) chain B residue 134 type sequence S description BINDING SITE FOR RESIDUE UNX B 560 source : CC4 85) chain B residue 137 type sequence M description BINDING SITE FOR RESIDUE UNX B 560 source : CC4 86) chain B residue 173 type sequence E description BINDING SITE FOR RESIDUE UNX B 561 source : CC5 87) chain B residue 174 type sequence K description BINDING SITE FOR RESIDUE UNX B 561 source : CC5 88) chain D residue 46 type sequence V description BINDING SITE FOR RESIDUE UNX D 554 source : CC6 89) chain C residue 1836 type sequence L description BINDING SITE FOR RESIDUE UNX C 20 source : CC7 90) chain C residue 1841 type sequence V description BINDING SITE FOR RESIDUE UNX C 20 source : CC7 91) chain A residue 1844 type sequence G description BINDING SITE FOR RESIDUE UNX D 556 source : CC8 92) chain D residue 38 type sequence Y description BINDING SITE FOR RESIDUE UNX D 556 source : CC8 93) chain D residue 49 type sequence N description BINDING SITE FOR RESIDUE UNX D 559 source : CC9 94) chain D residue 51 type sequence T description BINDING SITE FOR RESIDUE UNX D 559 source : CC9 95) chain D residue 49 type sequence N description BINDING SITE FOR RESIDUE UNX D 560 source : DC1 96) chain C residue 1770 type sequence K description BINDING SITE FOR RESIDUE UNX C 28 source : DC2 97) chain C residue 1787 type sequence Q description BINDING SITE FOR RESIDUE UNX C 28 source : DC2 98) chain D residue 148 type sequence S description BINDING SITE FOR RESIDUE UNX D 561 source : DC3 99) chain D residue 149 type sequence Y description BINDING SITE FOR RESIDUE UNX D 561 source : DC3 100) chain A residue 1821 type sequence D description BINDING SITE FOR RESIDUE UNX A 30 source : DC4 101) chain A residue 1824 type sequence S description BINDING SITE FOR RESIDUE UNX A 30 source : DC4 102) chain B residue 23 type BINDING sequence Q description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS source Swiss-Prot : SWS_FT_FI1 103) chain B residue 38 type BINDING sequence Y description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS source Swiss-Prot : SWS_FT_FI1 104) chain B residue 67 type BINDING sequence D description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS source Swiss-Prot : SWS_FT_FI1 105) chain B residue 125 type BINDING sequence C description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS source Swiss-Prot : SWS_FT_FI1 106) chain B residue 169 type BINDING sequence A description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS source Swiss-Prot : SWS_FT_FI1 107) chain D residue 23 type BINDING sequence Q description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS source Swiss-Prot : SWS_FT_FI1 108) chain D residue 38 type BINDING sequence Y description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS source Swiss-Prot : SWS_FT_FI1 109) chain D residue 67 type BINDING sequence D description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS source Swiss-Prot : SWS_FT_FI1 110) chain D residue 125 type BINDING sequence C description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS source Swiss-Prot : SWS_FT_FI1 111) chain D residue 169 type BINDING sequence A description BINDING => ECO:0000269|PubMed:19843518, ECO:0007744|PDB:2CLS source Swiss-Prot : SWS_FT_FI1 112) chain A residue 1821-1833 type prosite sequence DVTSEVQGLWRRL description LIPOCALIN Lipocalin signature. DVTs.EVQGLWRRL source prosite : PS00213

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