|
|
eF-site ID
|
2r92-A |
|
PDB Code
|
2r92 |
|
Chain
|
A |
|
click to enlarge
|
|
|
Title
|
Elongation complex of RNA polymerase II with artificial RdRP scaffold |
|
Classification
|
Transferase/RNA |
|
Compound
|
RNA (5'-R(*UP*GP*CP*AP*UP*AP*AP*AP*GP*AP*CP*CP*AP*GP*GP*C)-3') |
|
Source
|
ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; |
|
|
Sequence
|
A: |
VGQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETM
DETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHF
GHIDLAKPVFHVGFIAKIKKVCECVCMHCGKLLLDEHNEL
MRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQL
VSRGGCGNTQPTIRKDGLKLVGSWKKDRDEPELRVLSTEE
ILNIFKHISVKDFTSLGFNEVFSRPEWMILTCLPVPPPPV
RPSISFNESQRGEDDLTFKLADILKANISLETLEHNGAPH
HAIEEAESLLQFHVATYMDNDIAGQPQALQKSGRPVKSIR
ARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLELDQVGV
PKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVI
RDSGDRIDLRYSKRAGDIQLQYGWKVERHIMDNDPVLFNR
QPSLHKMSMMAHRVKVIPYSTFRLNLSVTSPYNADFDGDE
MNLHVPQSEETRAELSQLCAVPLQIVSPQSNKPCMGIVQD
TLCGIRKLTLRDTFIELDQVLNMLYWVPDWDGVIPTPAII
KPKPLWSGKQILSVAIPNGIHLQRFDEGTTLLSPKDNGML
IIDGQIIFGVVEKKTVGSSNGGLIHVVTREKGPQVCAKLF
GNIQKVVNFWLLHNGFSTGIGDTIADGPTMREITETIAEA
KKKVLDVTKEAQANLLTAKHGMTLRESFEDNVVRFLNEAR
DKAGRLAEVNLKDLNNVKQMVMAGSKGSFINIAQMSACVG
QQSVEGKRIAFGFVDRTLPHFSKDDYSPESKGFVENSYLR
GLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALE
DIMVHYDNTTRNSLGNVIQFIYGEDGMDAAHIEKQSLDTI
GGSDAAFEKRYRVDLLNTDHTLDPSLLESGSEILGDLKLQ
VLLDEEYKQLVKDRKFLREVFVDGEANWPLPVNIRRIIQN
AQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKNEI
IQNAQRDAVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVL
SNIEAQFLRSVVHPGEMVGVLAAQSIGEPATQMTLKKVTS
GVPRLKEILNVAKNMKTPSLTVYLEPGHAADQEQAKLIRS
AIEHTTLKSVTIASEIYYDPDPRSTVIPEDEEIIQLHFSL
LQQSPWLLRLELDRAAMNDKDLTMGQVGERIKQTFKNDLF
VIWSEDNDEKLIIRCRVVRPAEEDHMLKKIENTMLENITL
RGVENIERVVMMKYDRKVPSPTGEYVKEPEWVLETDGVNL
SEVMTVPGIDPTRIYTNSFIDIMEVLGIEAGRAALYKEVY
NVIASDGSYVNYRHMALLVDVMTTQGGLTSVTRHGFNRSN
TGALMRCSFEETVEILFEAGASAELDDCRGVSENVILGQM
APIGTGAFDVMIDEESLVKYMP
|
|
|
Description
|
(1) |
PROTEIN/RNA Complex
|
|
Functional site
|
|
|
1)
|
chain |
A |
| residue |
483 |
| type |
catalytic |
| sequence |
D
|
| description |
788
|
| source |
MCSA : MCSA1
|
|
|
2)
|
chain |
A |
| residue |
485 |
| type |
catalytic |
| sequence |
D
|
| description |
788
|
| source |
MCSA : MCSA1
|
|
|
3)
|
chain |
A |
| residue |
483 |
| type |
ZN_FING |
| sequence |
D
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
4)
|
chain |
A |
| residue |
485 |
| type |
ZN_FING |
| sequence |
D
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
5)
|
chain |
A |
| residue |
107 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
6)
|
chain |
A |
| residue |
110 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
7)
|
chain |
A |
| residue |
148 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
8)
|
chain |
A |
| residue |
167 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
9)
|
chain |
A |
| residue |
481 |
| type |
ZN_FING |
| sequence |
D
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|