eF-site ID 2qdy-AB
PDB Code 2qdy
Chain A, B

click to enlarge
Title Crystal Structure of Fe-type NHase from Rhodococcus erythropolis AJ270
Classification LYASE
Compound Nitrile hydratase subunit alpha
Source ORGANISM_SCIENTIFIC: Rhodococcus erythropolis;
Sequence A:  ENAAPAQAPVSDRAWALFRALDGKGLVPDGYVEGWKKTFE
EDFSPRRGAELVARAWTDPEFRQLLLTDGTAAVAQYGYLG
PQGEYIVAVEDTPTLKNVIVCSLXSXTAWPILGLPPTWYK
SFEYRARVVREPRKVLSEMGTEIASDIEIRVYDTTAETRY
MVLPQRPAGTEGWSQEQLQEIVTKDCLIGVAIPQVPT
B:  MDGVHDLAGVQGFGKVPHTVNADIGPTFHAEWEHLPYSLM
FAGVAELGAFSVDEVRYVVERMEPRHYMMTPYYERYVIGV
ATLMVEKGILTQDELESLAGGPFPLSRPSESEGRPAPVET
TTFEVGQRVRVRDEYVPGHIRMPAYCRGRVGTISHRTTEK
WPFPDAIGHGRNDAGEEPTYHVKFAAEELFGSDTDGGSVV
VDLFEGYLEPA
Description


Functional site

1) chain A
residue 110
type
sequence C
description BINDING SITE FOR RESIDUE FE A 300
source : AC1

2) chain A
residue 114
type
sequence S
description BINDING SITE FOR RESIDUE FE A 300
source : AC1

3) chain B
residue 121
type
sequence T
description BINDING SITE FOR RESIDUE CL B 2001
source : AC2

4) chain B
residue 132
type
sequence R
description BINDING SITE FOR RESIDUE CL B 2001
source : AC2

5) chain B
residue 208
type
sequence L
description BINDING SITE FOR RESIDUE CL B 2001
source : AC2

6) chain A
residue 20
type
sequence S
description BINDING SITE FOR RESIDUE CL A 2002
source : AC3

7) chain A
residue 24
type
sequence W
description BINDING SITE FOR RESIDUE CL A 2002
source : AC3

8) chain B
residue 31
type
sequence E
description BINDING SITE FOR RESIDUE CL A 2002
source : AC3

9) chain B
residue 32
type
sequence W
description BINDING SITE FOR RESIDUE CL A 2002
source : AC3

10) chain B
residue 134
type
sequence E
description BINDING SITE FOR RESIDUE CL B 2003
source : AC4

11) chain B
residue 135
type
sequence Y
description BINDING SITE FOR RESIDUE CL B 2003
source : AC4

12) chain B
residue 192
type
sequence S
description BINDING SITE FOR RESIDUE CL B 2003
source : AC4

13) chain A
residue 174
type
sequence Q
description BINDING SITE FOR RESIDUE CL A 2004
source : AC5

14) chain A
residue 175
type
sequence R
description BINDING SITE FOR RESIDUE CL A 2004
source : AC5

15) chain A
residue 91
type
sequence Q
description BINDING SITE FOR RESIDUE IBN B 1000
source : AC9

16) chain B
residue 37
type
sequence Y
description BINDING SITE FOR RESIDUE IBN B 1000
source : AC9

17) chain B
residue 40
type
sequence M
description BINDING SITE FOR RESIDUE IBN B 1000
source : AC9

18) chain B
residue 72
type
sequence Y
description BINDING SITE FOR RESIDUE IBN B 1000
source : AC9

19) chain B
residue 76
type
sequence Y
description BINDING SITE FOR RESIDUE IBN B 1000
source : AC9

20) chain A
residue 40
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 1100
source : BC1

21) chain A
residue 43
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 1100
source : BC1

22) chain A
residue 44
type
sequence W
description BINDING SITE FOR RESIDUE GOL A 1100
source : BC1

23) chain A
residue 47
type
sequence T
description BINDING SITE FOR RESIDUE GOL A 1100
source : BC1

24) chain A
residue 77
type
sequence D
description BINDING SITE FOR RESIDUE GOL A 1200
source : BC2

25) chain A
residue 78
type
sequence G
description BINDING SITE FOR RESIDUE GOL A 1200
source : BC2

26) chain A
residue 79
type
sequence T
description BINDING SITE FOR RESIDUE GOL A 1200
source : BC2

27) chain A
residue 94
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A 1200
source : BC2

28) chain A
residue 95
type
sequence I
description BINDING SITE FOR RESIDUE GOL A 1200
source : BC2

29) chain B
residue 158
type
sequence T
description BINDING SITE FOR RESIDUE GOL A 1200
source : BC2

30) chain A
residue 139
type
sequence R
description BINDING SITE FOR RESIDUE GOL B 1300
source : BC3

31) chain A
residue 140
type
sequence E
description BINDING SITE FOR RESIDUE GOL B 1300
source : BC3

32) chain B
residue 11
type
sequence Q
description BINDING SITE FOR RESIDUE GOL B 1300
source : BC3

33) chain B
residue 137
type
sequence P
description BINDING SITE FOR RESIDUE GOL B 1300
source : BC3

34) chain B
residue 193
type
sequence D
description BINDING SITE FOR RESIDUE GOL B 1300
source : BC3

35) chain B
residue 194
type
sequence T
description BINDING SITE FOR RESIDUE GOL B 1300
source : BC3

36) chain B
residue 195
type
sequence D
description BINDING SITE FOR RESIDUE GOL B 1300
source : BC3

37) chain B
residue 147
type
sequence R
description BINDING SITE FOR RESIDUE GOL B 1400
source : BC4

38) chain B
residue 148
type
sequence G
description BINDING SITE FOR RESIDUE GOL B 1400
source : BC4

39) chain B
residue 149
type
sequence R
description BINDING SITE FOR RESIDUE GOL B 1400
source : BC4

40) chain A
residue 161
type
sequence Y
description BINDING SITE FOR RESIDUE GOL B 1500
source : BC5

41) chain B
residue 154
type
sequence S
description BINDING SITE FOR RESIDUE GOL B 1500
source : BC5

42) chain B
residue 155
type
sequence H
description BINDING SITE FOR RESIDUE GOL B 1500
source : BC5

43) chain B
residue 181
type
sequence H
description BINDING SITE FOR RESIDUE GOL B 1500
source : BC5

44) chain A
residue 65
type
sequence W
description BINDING SITE FOR RESIDUE GOL B 1600
source : BC6

45) chain A
residue 66
type
sequence T
description BINDING SITE FOR RESIDUE GOL B 1600
source : BC6

46) chain A
residue 67
type
sequence D
description BINDING SITE FOR RESIDUE GOL B 1600
source : BC6

47) chain A
residue 68
type
sequence P
description BINDING SITE FOR RESIDUE GOL B 1600
source : BC6

48) chain A
residue 175
type
sequence R
description BINDING SITE FOR RESIDUE GOL B 1600
source : BC6

49) chain B
residue 92
type
sequence Q
description BINDING SITE FOR RESIDUE GOL B 1600
source : BC6

50) chain B
residue 93
type
sequence D
description BINDING SITE FOR RESIDUE GOL B 1600
source : BC6

51) chain B
residue 56
type catalytic
sequence R
description 57
source MCSA : MCSA1

52) chain B
residue 72
type catalytic
sequence Y
description 57
source MCSA : MCSA1

53) chain B
residue 76
type catalytic
sequence Y
description 57
source MCSA : MCSA1

54) chain A
residue 115
type catalytic
sequence X
description 57
source MCSA : MCSA1

55) chain A
residue 115
type MOD_RES
sequence X
description Cysteine sulfenic acid (-SOH) => ECO:0000269|PubMed:9586994
source Swiss-Prot : SWS_FT_FI3

56) chain A
residue 110
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:9586994, ECO:0007744|PDB:2AHJ
source Swiss-Prot : SWS_FT_FI1

57) chain A
residue 113
type BINDING
sequence X
description BINDING => ECO:0000269|PubMed:9586994, ECO:0007744|PDB:2AHJ
source Swiss-Prot : SWS_FT_FI1

58) chain A
residue 114
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:9586994, ECO:0007744|PDB:2AHJ
source Swiss-Prot : SWS_FT_FI1

59) chain A
residue 115
type BINDING
sequence X
description BINDING => ECO:0000269|PubMed:9586994, ECO:0007744|PDB:2AHJ
source Swiss-Prot : SWS_FT_FI1

60) chain A
residue 113
type MOD_RES
sequence X
description Cysteine sulfinic acid (-SO2H) => ECO:0000269|PubMed:9368004, ECO:0000269|PubMed:9586994
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links