|
eF-site ID
|
2q6f-A |
PDB Code
|
2q6f |
Chain
|
A |
|
click to enlarge
|
|
Title
|
Crystal structure of infectious bronchitis virus (IBV) main protease in complex with a Michael acceptor inhibitor N3 |
Classification
|
HYDROLASE |
Compound
|
Infectious bronchitis virus (IBV) main protease |
Source
|
Infectious bronchitis virus (2Q6F) |
|
Sequence
|
A: |
SGFKKLVSPSSAVEKCIVSVSYRGNNLNGLWLGDSIYCPR
HVLGKFSGDQWGDVLNLANNHEFEVVTQNGVTLNVVSRRL
KGAVLILQTAVANAETPKYKFVKANCGDSFTIACSYGGTV
IGLYPVTMRSNGTIRASFLAGACGSVGFNIEKGVVNFFYM
HHLELPNALHTGTDLMGEFYGGYVDEEVAQRVPPDNLVTN
NIVAWLYAAIISVPKWLESTTVSIEDYNRWASDNGFTPFS
TSTAITKLSAITGVDVCKLLRTIMVKSAQWGSDPILGQYN
FEDELTPESVFNQV
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
41 |
type |
|
sequence |
H
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
2)
|
chain |
A |
residue |
138 |
type |
|
sequence |
F
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
3)
|
chain |
A |
residue |
140 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
4)
|
chain |
A |
residue |
141 |
type |
|
sequence |
G
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
5)
|
chain |
A |
residue |
143 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
6)
|
chain |
A |
residue |
161 |
type |
|
sequence |
H
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
7)
|
chain |
A |
residue |
162 |
type |
|
sequence |
H
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
8)
|
chain |
A |
residue |
163 |
type |
|
sequence |
L
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
9)
|
chain |
A |
residue |
164 |
type |
|
sequence |
E
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
10)
|
chain |
A |
residue |
170 |
type |
|
sequence |
H
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
11)
|
chain |
A |
residue |
186 |
type |
|
sequence |
E
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
12)
|
chain |
A |
residue |
187 |
type |
|
sequence |
E
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
13)
|
chain |
A |
residue |
188 |
type |
|
sequence |
V
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
14)
|
chain |
A |
residue |
189 |
type |
|
sequence |
A
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
15)
|
chain |
A |
residue |
256 |
type |
|
sequence |
S
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
16)
|
chain |
A |
residue |
260 |
type |
|
sequence |
G
|
description |
BINDING SITE FOR CHAIN D
|
source |
: AC1
|
|
17)
|
chain |
A |
residue |
41 |
type |
ACT_SITE |
sequence |
H
|
description |
For 3CL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00772
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
18)
|
chain |
A |
residue |
143 |
type |
ACT_SITE |
sequence |
C
|
description |
For 3CL-PRO activity => ECO:0000255|PROSITE-ProRule:PRU00772
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|