eF-site ID 2q61-B
PDB Code 2q61
Chain B

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Title Crystal Structure of PPARgamma ligand binding domain bound to partial agonist SR145
Classification Ligand binding protein
Compound Peroxisome Proliferator-Activated Receptor gamma
Source Homo sapiens (Human) (PPARG_HUMAN)
Sequence B:  ESADLRALAKHLYDSYIKSFPLTKAKARAILTGKTKSPFV
IYDMNSLMMGEDKIKFKHIKEVAIRIFQGCQFRSVEAVQE
ITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMN
KDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFN
ALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQ
ALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQV
IKKTETDMHPLLQEIYKDL
Description


Functional site

1) chain B
residue 255
type
sequence L
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

2) chain B
residue 264
type
sequence F
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

3) chain B
residue 266
type
sequence H
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

4) chain B
residue 281
type
sequence I
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

5) chain B
residue 284
type
sequence G
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

6) chain B
residue 285
type
sequence C
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

7) chain B
residue 288
type
sequence R
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

8) chain B
residue 340
type
sequence L
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

9) chain B
residue 341
type
sequence I
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

10) chain B
residue 342
type
sequence S
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

11) chain B
residue 348
type
sequence M
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

12) chain B
residue 353
type
sequence L
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

13) chain B
residue 363
type
sequence F
description BINDING SITE FOR RESIDUE SF1 B 5001
source : AC1

14) chain B
residue 286
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

15) chain B
residue 323
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

16) chain B
residue 449
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

17) chain B
residue 473
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

18) chain B
residue 224
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2


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