eF-site ID 2pob-AB
PDB Code 2pob
Chain A, B

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Title PPARgamma Ligand binding domain complexed with a farglitazar analogue gw4709
Classification GENE REGULATION
Compound Peroxisome proliferator-activated receptor gamma
Source null (PPARG_HUMAN)
Sequence A:  ESADLRALAKHLYDSYIKSFPLTKAKARAILTGKKSPFVI
YDMNSLMMGEDKIKKEVAIRIFQGCQFRSVEAVQEITEYA
KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVL
ISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELD
DSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTE
TDMSLHPLLQEIYKD
B:  PESADLRALAKHLYDSYIKSFPLTKAKARAILTGSPFVIY
DMNSLMMGQSKEVAIRIFQGCQFRSVEAVQEITEYAKSIP
GFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEG
QGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDL
AIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLN
HPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETLHP
LLQEIYK
Description


Functional site

1) chain A
residue 282
type
sequence F
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

2) chain A
residue 285
type
sequence C
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

3) chain A
residue 286
type
sequence Q
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

4) chain A
residue 289
type
sequence S
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

5) chain A
residue 323
type
sequence H
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

6) chain A
residue 326
type
sequence I
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

7) chain A
residue 341
type
sequence I
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

8) chain A
residue 360
type
sequence F
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

9) chain A
residue 363
type
sequence F
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

10) chain A
residue 364
type
sequence M
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

11) chain A
residue 449
type
sequence H
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

12) chain A
residue 469
type
sequence L
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

13) chain A
residue 473
type
sequence Y
description BINDING SITE FOR RESIDUE GW4 A 478
source : AC1

14) chain B
residue 288
type
sequence R
description BINDING SITE FOR RESIDUE GOL B 478
source : AC2

15) chain B
residue 341
type
sequence I
description BINDING SITE FOR RESIDUE GOL B 478
source : AC2

16) chain B
residue 342
type
sequence S
description BINDING SITE FOR RESIDUE GOL B 478
source : AC2

17) chain A
residue 224
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2

18) chain B
residue 224
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:36737649
source Swiss-Prot : SWS_FT_FI2

19) chain B
residue 449
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

20) chain B
residue 473
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

21) chain A
residue 286
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

22) chain A
residue 323
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

23) chain A
residue 449
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

24) chain A
residue 473
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

25) chain B
residue 286
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1

26) chain B
residue 323
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:9744270, ECO:0007744|PDB:2PRG
source Swiss-Prot : SWS_FT_FI1


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