|
eF-site ID
|
2p7v-AB |
PDB Code
|
2p7v |
Chain
|
A, B |
|
click to enlarge
|
|
Title
|
Crystal structure of the Escherichia coli regulator of sigma 70, Rsd, in complex with sigma 70 domain 4 |
Classification
|
TRANSCRIPTION |
Compound
|
Regulator of sigma D |
Source
|
Escherichia coli (strain K12) (RPOD_ECOLI) |
|
Sequence
|
A: |
MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIK
PGNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLA
RAAKIWPQLEANTQQIMDYYDSSLETAIDHDNYLEFQQVL
SDIGEALEARFVLEDKLILLVLDAARVKHPA
|
B: |
DVLAGLTAREAKVLRMRFGIDMNTDYTLEEVGKQFDVTRE
RIRQIEAKALRKLRHPSRSEVLRSFLDD
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
B |
residue |
605 |
type |
|
sequence |
E
|
description |
BINDING SITE FOR RESIDUE MG B 101
|
source |
: AC1
|
|
2)
|
chain |
B |
residue |
605 |
type |
|
sequence |
E
|
description |
BINDING SITE FOR RESIDUE MG B 101
|
source |
: AC1
|
|
3)
|
chain |
B |
residue |
608 |
type |
|
sequence |
R
|
description |
BINDING SITE FOR RESIDUE MG B 101
|
source |
: AC1
|
|
4)
|
chain |
B |
residue |
608 |
type |
|
sequence |
R
|
description |
BINDING SITE FOR RESIDUE MG B 101
|
source |
: AC1
|
|
5)
|
chain |
B |
residue |
573-592 |
type |
DNA_BIND |
sequence |
LEEVGKQFDVTRERIRQIEA
|
description |
H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
6)
|
chain |
B |
residue |
572-598 |
type |
prosite |
sequence |
TLEEVGKQFDVTRERIRQIEAKALRKL
|
description |
SIGMA70_2 Sigma-70 factors family signature 2. TleEVGkqfdVTrerIrQIEakaLrkL
|
source |
prosite : PS00716
|
|
7)
|
chain |
B |
residue |
562 |
type |
SITE |
sequence |
R
|
description |
Interaction with anti-sigma factors
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|