eF-site ID 2odb-AB
PDB Code 2odb
Chain A, B

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Title The crystal structure of human cdc42 in complex with the CRIB domain of human p21-activated kinase 6 (PAK6)
Classification PROTEIN BINDING
Compound Human Cell Division Cycle 42 (CDC42)
Source null (CDC42_HUMAN)
Sequence A:  QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYA
VTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVC
FSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRD
DPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALT
QKGLKNVFDEAILAALE
B:  EISAPQNFQHRVHTSFDPKEGKFVGLPPQWQNILD
Description


Functional site

1) chain A
residue 2
type
sequence Q
description BINDING SITE FOR RESIDUE CL A 204
source : AC1

2) chain A
residue 17
type
sequence T
description BINDING SITE FOR RESIDUE MG A 205
source : AC2

3) chain A
residue 35
type
sequence T
description BINDING SITE FOR RESIDUE MG A 205
source : AC2

4) chain B
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE SO4 B 201
source : AC3

5) chain B
residue 14
type
sequence A
description BINDING SITE FOR RESIDUE SO4 B 201
source : AC3

6) chain A
residue 47
type
sequence G
description BINDING SITE FOR RESIDUE SO4 A 202
source : AC4

7) chain B
residue 11
type
sequence E
description BINDING SITE FOR RESIDUE SO4 A 202
source : AC4

8) chain B
residue 16
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 202
source : AC4

9) chain B
residue 17
type
sequence N
description BINDING SITE FOR RESIDUE SO4 A 202
source : AC4

10) chain A
residue 5
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 203
source : AC5

11) chain A
residue 56
type
sequence F
description BINDING SITE FOR RESIDUE SO4 A 203
source : AC5

12) chain A
residue 73
type
sequence P
description BINDING SITE FOR RESIDUE SO4 A 203
source : AC5

13) chain A
residue 74
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 203
source : AC5

14) chain B
residue 39
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 203
source : AC5

15) chain A
residue 12
type
sequence G
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

16) chain A
residue 13
type
sequence A
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

17) chain A
residue 14
type
sequence V
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

18) chain A
residue 15
type
sequence G
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

19) chain A
residue 16
type
sequence K
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

20) chain A
residue 17
type
sequence T
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

21) chain A
residue 18
type
sequence C
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

22) chain A
residue 28
type
sequence F
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

23) chain A
residue 32
type
sequence Y
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

24) chain A
residue 34
type
sequence P
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

25) chain A
residue 35
type
sequence T
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

26) chain A
residue 60
type
sequence G
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

27) chain A
residue 116
type
sequence Q
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

28) chain A
residue 118
type
sequence D
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

29) chain A
residue 119
type
sequence L
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

30) chain A
residue 158
type
sequence S
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

31) chain A
residue 159
type
sequence A
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

32) chain A
residue 160
type
sequence L
description BINDING SITE FOR RESIDUE GCP A 200
source : AC6

33) chain A
residue 35
type CARBOHYD
sequence T
description (Microbial infection) O-linked (Glc) threonine; by C.difficile toxins TcdA and TcdB; alternate => ECO:0000269|PubMed:24905543, ECO:0000269|PubMed:7775453, ECO:0000269|PubMed:7777059
source Swiss-Prot : SWS_FT_FI9

34) chain A
residue 32
type MOD_RES
sequence Y
description (Microbial infection) O-AMP-tyrosine; by Haemophilus IbpA; alternate => ECO:0000269|PubMed:19362538, ECO:0000269|PubMed:20622875
source Swiss-Prot : SWS_FT_FI3

35) chain A
residue 35
type MOD_RES
sequence T
description (Microbial infection) O-AMP-threonine; by Vibrio VopS => ECO:0000269|PubMed:19039103
source Swiss-Prot : SWS_FT_FI4

36) chain A
residue 64
type MOD_RES
sequence Y
description Phosphotyrosine; by SRC => ECO:0000269|PubMed:14506284
source Swiss-Prot : SWS_FT_FI5

37) chain A
residue 32
type CARBOHYD
sequence Y
description (Microbial infection) O-linked (GlcNAc) tyrosine; by Photorhabdus PAU_02230; alternate => ECO:0000269|PubMed:24141704
source Swiss-Prot : SWS_FT_FI8

38) chain A
residue 10
type BINDING
sequence G
description
source Swiss-Prot : SWS_FT_FI1

39) chain A
residue 115
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI1

40) chain A
residue 57
type BINDING
sequence D
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2


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