eF-site ID 2o1p-AB
PDB Code 2o1p
Chain A, B

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Title Structure of yeast Poly(A) Polymerase in a somewhat closed state
Classification TRANSFERASE
Compound Poly(A) polymerase
Source null (PAP_YEAST)
Sequence A:  QKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQ
ETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGK
IFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSL
LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQP
QVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPK
PNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI
CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQ
VRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKV
ILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE
ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAH
PFTKPFESSYCCPTEDDYEMIQDKYGSHKTETALNALKLV
TDEIKDAPKAYLSTMYIGLDFNIENKKEKVDIHIPCTEFV
NLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRP
SKK
B:  SQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETE
QETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGG
KIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDS
LLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQ
PQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVP
KPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVAR
ICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPL
QVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKK
VILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYL
EITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIA
HPFTKPFESSYCCPTEDDYEMIQDKYGSHKTETALNALKL
VTDENKEDAPKAYLSTMYIGLDFNIENKKEKVDIHIPCTE
FVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEK
RP
Description


Functional site

1) chain A
residue 87
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 99
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 215
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 224
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 233
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

6) chain B
residue 233
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

7) chain B
residue 224
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

8) chain B
residue 87
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

9) chain B
residue 99
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 215
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

11) chain A
residue 314
type SITE
sequence H
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

12) chain A
residue 315
type SITE
sequence N
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

13) chain A
residue 387
type SITE
sequence R
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

14) chain B
residue 145
type SITE
sequence K
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

15) chain B
residue 294
type SITE
sequence Q
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

16) chain B
residue 314
type SITE
sequence H
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

17) chain B
residue 315
type SITE
sequence N
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

18) chain B
residue 387
type SITE
sequence R
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

19) chain B
residue 392
type SITE
sequence K
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

20) chain B
residue 487
type SITE
sequence E
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

21) chain A
residue 392
type SITE
sequence K
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

22) chain A
residue 487
type SITE
sequence E
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

23) chain B
residue 140
type SITE
sequence F
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

24) chain A
residue 140
type SITE
sequence F
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

25) chain A
residue 145
type SITE
sequence K
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

26) chain A
residue 294
type SITE
sequence Q
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

27) chain A
residue 89
type catalytic
sequence S
description 796
source MCSA : MCSA1

28) chain A
residue 100
type catalytic
sequence D
description 796
source MCSA : MCSA1

29) chain A
residue 102
type catalytic
sequence D
description 796
source MCSA : MCSA1

30) chain A
residue 154
type catalytic
sequence D
description 796
source MCSA : MCSA1

31) chain A
residue 215
type catalytic
sequence K
description 796
source MCSA : MCSA1

32) chain A
residue 224
type catalytic
sequence Y
description 796
source MCSA : MCSA1

33) chain B
residue 89
type catalytic
sequence S
description 796
source MCSA : MCSA2

34) chain B
residue 100
type catalytic
sequence D
description 796
source MCSA : MCSA2

35) chain B
residue 102
type catalytic
sequence D
description 796
source MCSA : MCSA2

36) chain B
residue 154
type catalytic
sequence D
description 796
source MCSA : MCSA2

37) chain B
residue 215
type catalytic
sequence K
description 796
source MCSA : MCSA2

38) chain B
residue 224
type catalytic
sequence Y
description 796
source MCSA : MCSA2

39) chain B
residue 100
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

40) chain B
residue 102
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

41) chain B
residue 154
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

42) chain A
residue 100
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

43) chain A
residue 102
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

44) chain A
residue 154
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2


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