eF-site ID 2o1p-A
PDB Code 2o1p
Chain A

click to enlarge
Title Structure of yeast Poly(A) Polymerase in a somewhat closed state
Classification TRANSFERASE
Compound Poly(A) polymerase
Source null (PAP_YEAST)
Sequence A:  QKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQ
ETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGK
IFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSL
LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQP
QVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPK
PNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI
CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQ
VRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKV
ILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE
ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAH
PFTKPFESSYCCPTEDDYEMIQDKYGSHKTETALNALKLV
TDEIKDAPKAYLSTMYIGLDFNIENKKEKVDIHIPCTEFV
NLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRP
SKK
Description


Functional site

1) chain A
residue 87
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 99
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 215
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 224
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 233
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 314
type SITE
sequence H
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

7) chain A
residue 315
type SITE
sequence N
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

8) chain A
residue 387
type SITE
sequence R
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

9) chain A
residue 392
type SITE
sequence K
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

10) chain A
residue 487
type SITE
sequence E
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

11) chain A
residue 140
type SITE
sequence F
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

12) chain A
residue 145
type SITE
sequence K
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

13) chain A
residue 294
type SITE
sequence Q
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

14) chain A
residue 89
type catalytic
sequence S
description 796
source MCSA : MCSA1

15) chain A
residue 100
type catalytic
sequence D
description 796
source MCSA : MCSA1

16) chain A
residue 102
type catalytic
sequence D
description 796
source MCSA : MCSA1

17) chain A
residue 154
type catalytic
sequence D
description 796
source MCSA : MCSA1

18) chain A
residue 215
type catalytic
sequence K
description 796
source MCSA : MCSA1

19) chain A
residue 224
type catalytic
sequence Y
description 796
source MCSA : MCSA1

20) chain A
residue 100
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

21) chain A
residue 102
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

22) chain A
residue 154
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links