|
eF-site ID
|
2o1p-A |
PDB Code
|
2o1p |
Chain
|
A |
|
click to enlarge
|
|
Title
|
Structure of yeast Poly(A) Polymerase in a somewhat closed state |
Classification
|
TRANSFERASE |
Compound
|
Poly(A) polymerase |
Source
|
null (PAP_YEAST) |
|
Sequence
|
A: |
QKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQ
ETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGK
IFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSL
LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQP
QVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPK
PNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI
CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQ
VRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKV
ILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE
ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAH
PFTKPFESSYCCPTEDDYEMIQDKYGSHKTETALNALKLV
TDEIKDAPKAYLSTMYIGLDFNIENKKEKVDIHIPCTEFV
NLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRP
SKK
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
87 |
type |
BINDING |
sequence |
Y
|
description |
BINDING => ECO:0000269|PubMed:17850751
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
2)
|
chain |
A |
residue |
99 |
type |
BINDING |
sequence |
S
|
description |
BINDING => ECO:0000269|PubMed:17850751
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
A |
residue |
215 |
type |
BINDING |
sequence |
K
|
description |
BINDING => ECO:0000269|PubMed:17850751
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
4)
|
chain |
A |
residue |
224 |
type |
BINDING |
sequence |
Y
|
description |
BINDING => ECO:0000269|PubMed:17850751
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
5)
|
chain |
A |
residue |
233 |
type |
BINDING |
sequence |
G
|
description |
BINDING => ECO:0000269|PubMed:17850751
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
6)
|
chain |
A |
residue |
314 |
type |
SITE |
sequence |
H
|
description |
Interaction with RNA
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
7)
|
chain |
A |
residue |
315 |
type |
SITE |
sequence |
N
|
description |
Interaction with RNA
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
8)
|
chain |
A |
residue |
387 |
type |
SITE |
sequence |
R
|
description |
Interaction with RNA
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
9)
|
chain |
A |
residue |
392 |
type |
SITE |
sequence |
K
|
description |
Interaction with RNA
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
10)
|
chain |
A |
residue |
487 |
type |
SITE |
sequence |
E
|
description |
Interaction with RNA
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
11)
|
chain |
A |
residue |
140 |
type |
SITE |
sequence |
F
|
description |
Interaction with RNA
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
12)
|
chain |
A |
residue |
145 |
type |
SITE |
sequence |
K
|
description |
Interaction with RNA
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
13)
|
chain |
A |
residue |
294 |
type |
SITE |
sequence |
Q
|
description |
Interaction with RNA
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
14)
|
chain |
A |
residue |
89 |
type |
catalytic |
sequence |
S
|
description |
796
|
source |
MCSA : MCSA1
|
|
15)
|
chain |
A |
residue |
100 |
type |
catalytic |
sequence |
D
|
description |
796
|
source |
MCSA : MCSA1
|
|
16)
|
chain |
A |
residue |
102 |
type |
catalytic |
sequence |
D
|
description |
796
|
source |
MCSA : MCSA1
|
|
17)
|
chain |
A |
residue |
154 |
type |
catalytic |
sequence |
D
|
description |
796
|
source |
MCSA : MCSA1
|
|
18)
|
chain |
A |
residue |
215 |
type |
catalytic |
sequence |
K
|
description |
796
|
source |
MCSA : MCSA1
|
|
19)
|
chain |
A |
residue |
224 |
type |
catalytic |
sequence |
Y
|
description |
796
|
source |
MCSA : MCSA1
|
|
20)
|
chain |
A |
residue |
100 |
type |
BINDING |
sequence |
D
|
description |
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
21)
|
chain |
A |
residue |
102 |
type |
BINDING |
sequence |
D
|
description |
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
22)
|
chain |
A |
residue |
154 |
type |
BINDING |
sequence |
D
|
description |
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|