eF-site ID 2nnp-B
PDB Code 2nnp
Chain B

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Title Crystal structure analysis of HIV-1 protease mutant I84V with a inhibitor saquinavir
Classification HYDROLASE/HYDROLASE INHIBITOR
Compound PROTEASE
Source Human immunodeficiency virus type 1 group M subtype B (isolate BH5) (HIV-1) (POL_HV1B5)
Sequence B:  PQITLWKRPLVTIKIGGQLKEALLDTGADDTVIEEMSLPG
RWKPKMIGGIGGFIKVRQYDQIIIEIAGHKAIGTVLVGPT
PVNVIGRNLLTQIGATLNF
Description


Functional site

1) chain B
residue 101
type
sequence P
description BINDING SITE FOR RESIDUE SO4 B 603
source : AC1

2) chain B
residue 157
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 603
source : AC1

3) chain B
residue 169
type
sequence H
description BINDING SITE FOR RESIDUE SO4 B 603
source : AC1

4) chain B
residue 108
type
sequence R
description BINDING SITE FOR RESIDUE ROC A 401
source : AC2

5) chain B
residue 125
type
sequence D
description BINDING SITE FOR RESIDUE ROC A 401
source : AC2

6) chain B
residue 127
type
sequence G
description BINDING SITE FOR RESIDUE ROC A 401
source : AC2

7) chain B
residue 148
type
sequence G
description BINDING SITE FOR RESIDUE ROC A 401
source : AC2

8) chain B
residue 150
type
sequence I
description BINDING SITE FOR RESIDUE ROC A 401
source : AC2

9) chain B
residue 181
type
sequence P
description BINDING SITE FOR RESIDUE ROC A 401
source : AC2

10) chain B
residue 136
type
sequence M
description BINDING SITE FOR RESIDUE ACY B 602
source : AC4

11) chain B
residue 137
type
sequence S
description BINDING SITE FOR RESIDUE ACY B 602
source : AC4

12) chain B
residue 129
type
sequence D
description BINDING SITE FOR RESIDUE GOL A 604
source : AC5

13) chain B
residue 187
type
sequence R
description BINDING SITE FOR RESIDUE GOL A 604
source : AC5

14) chain B
residue 169
type
sequence H
description BINDING SITE FOR RESIDUE GOL A 605
source : AC6

15) chain B
residue 170
type
sequence K
description BINDING SITE FOR RESIDUE GOL A 605
source : AC6

16) chain B
residue 199
type
sequence F
description BINDING SITE FOR RESIDUE GOL A 605
source : AC6

17) chain B
residue 101
type SITE
sequence P
description Cleavage; by viral protease => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

18) chain B
residue 126
type ACT_SITE
sequence T
description For protease activity; shared with dimeric partner => ECO:0000255|PROSITE-ProRule:PRU10094
source Swiss-Prot : SWS_FT_FI1


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