eF-site ID 2mmt_13-A
PDB Code 2mmt
Model 13
Chain A

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Title Lasso peptide-based integrin inhibitor: Microcin J25 variant with RGDF substitution of Gly12-Ile13-Gly14-Thr15
Classification ANTIBIOTIC
Compound Microcin J25 RGDF mutant
Source Escherichia coli (MCJA_ECOLX)
Sequence A:  GGAGHVPEYFVRGDFPISFYG
Description (1)  Microcin J25


Functional site

1) chain A
residue 4
type SITE
sequence G
description Essential for permeation into bacteria => ECO:0000269|PubMed:18632663
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 7
type SITE
sequence P
description Essential for permeation into bacteria => ECO:0000269|PubMed:18632663
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 10
type SITE
sequence F
description Essential for permeation into bacteria => ECO:0000269|PubMed:18632663
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 19
type SITE
sequence F
description Essential for permeation into bacteria => ECO:0000269|PubMed:18632663
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 20
type SITE
sequence Y
description Essential for permeation into bacteria => ECO:0000269|PubMed:18632663
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 9
type SITE
sequence Y
description Essential for permeation into bacteria and for RNAP inhibition => ECO:0000269|PubMed:18632663
source Swiss-Prot : SWS_FT_FI2

7) chain A
residue 8
type CROSSLNK
sequence E
description Isoglutamyl glycine isopeptide (Gly-Glu) => ECO:0000269|PubMed:14531661, ECO:0000269|PubMed:14531690, ECO:0000269|PubMed:14531691
source Swiss-Prot : SWS_FT_FI3

8) chain A
residue 1
type CROSSLNK
sequence G
description Isoglutamyl glycine isopeptide (Gly-Glu) => ECO:0000269|PubMed:14531661, ECO:0000269|PubMed:14531690, ECO:0000269|PubMed:14531691
source Swiss-Prot : SWS_FT_FI3


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