eF-site ID 2m2w_1-A
PDB Code 2m2w
Model 1
Chain A

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Title Ternary complex of ASFV Pol X with DNA and MgdGTP
Classification TRANSFERASE/DNA
Compound Repair DNA polymerase X
Source null (2M2W)
Sequence A:  MLTLIQGKKIVNHLRSRLAFEYNGQLIKILSKNIVAVGSL
RREEKMLNDVDLLIIVPEKKLLKHVLPNIRIKGLSFSVKV
CGERKCVLFIEWEKKTYQLDLFTALAEEKPYAIFHFTGPV
SYLIRIRAALKKKNYKLNQYGLFKNQTLVPLKITTEKELI
KELGFTYRIPKKRL
Description (1)  Repair DNA polymerase X (E.C.2.7.7.7)/DNA complex


Functional site

1) chain A
residue 38
type
sequence G
description BINDING SITE FOR RESIDUE DGT A 201
source : AC1

2) chain A
residue 39
type
sequence S
description BINDING SITE FOR RESIDUE DGT A 201
source : AC1

3) chain A
residue 42
type
sequence R
description BINDING SITE FOR RESIDUE DGT A 201
source : AC1

4) chain A
residue 48
type
sequence N
description BINDING SITE FOR RESIDUE DGT A 201
source : AC1

5) chain A
residue 49
type
sequence D
description BINDING SITE FOR RESIDUE DGT A 201
source : AC1

6) chain A
residue 51
type
sequence D
description BINDING SITE FOR RESIDUE DGT A 201
source : AC1

7) chain A
residue 100
type
sequence D
description BINDING SITE FOR RESIDUE DGT A 201
source : AC1

8) chain A
residue 102
type
sequence F
description BINDING SITE FOR RESIDUE DGT A 201
source : AC1

9) chain A
residue 115
type
sequence H
description BINDING SITE FOR RESIDUE DGT A 201
source : AC1

10) chain A
residue 116
type
sequence F
description BINDING SITE FOR RESIDUE DGT A 201
source : AC1

11) chain A
residue 49
type
sequence D
description BINDING SITE FOR RESIDUE MG A 202
source : AC2

12) chain A
residue 51
type
sequence D
description BINDING SITE FOR RESIDUE MG A 202
source : AC2

13) chain A
residue 100
type
sequence D
description BINDING SITE FOR RESIDUE MG A 202
source : AC2

14) chain A
residue 49
type
sequence D
description BINDING SITE FOR RESIDUE MG A 203
source : AC3

15) chain A
residue 51
type
sequence D
description BINDING SITE FOR RESIDUE MG A 203
source : AC3

16) chain A
residue 38-57
type prosite
sequence GSLRREEKMLNDVDLLIIVP
description DNA_POLYMERASE_X DNA polymerase family X signature. GSLrREekmLnDVDLLIivP
source prosite : PS00522

17) chain A
residue 115
type SITE
sequence H
description Stabilizes dGTP in a syn confromation to overcome the Watson-Crick base pairing constraint => ECO:0000269|PubMed:24617852
source Swiss-Prot : SWS_FT_FI2

18) chain A
residue 49
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:11685239, ECO:0000305|PubMed:28245220
source Swiss-Prot : SWS_FT_FI1

19) chain A
residue 51
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:11685239, ECO:0000305|PubMed:28245220
source Swiss-Prot : SWS_FT_FI1

20) chain A
residue 100
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:11685239, ECO:0000305|PubMed:28245220
source Swiss-Prot : SWS_FT_FI1


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