|
|
eF-site ID
|
2k8t-AB |
|
PDB Code
|
2k8t |
|
Chain
|
A, B |
|
click to enlarge
|
|
|
Title
|
Solution NMR structure of trans-4-hydroxynonenal derived dG adduct of (6R,8S,11R)-configuration opposite dC |
|
Classification
|
DNA |
|
Compound
|
5'-D(*DGP*DCP*DTP*DAP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DC)-3' |
|
Source
|
(2K8T) |
|
|
Sequence
|
A: |
GCTAGCGAGTCC
|
| B: |
GGACTCGCTAGC
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
A |
| residue |
7 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE HNB A 125
|
| source |
: AC1
|
|
|
2)
|
chain |
A |
| residue |
8 |
| type |
|
| sequence |
A
|
| description |
BINDING SITE FOR RESIDUE HNB A 125
|
| source |
: AC1
|
|
|
3)
|
chain |
A |
| residue |
9 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE HNB A 125
|
| source |
: AC1
|
|
|
4)
|
chain |
B |
| residue |
19 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE HNB A 125
|
| source |
: AC1
|
|
|
5)
|
chain |
B |
| residue |
20 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE HNB A 125
|
| source |
: AC1
|
|
|
|