eF-site ID 2jzw_12-B
PDB Code 2jzw
Model 12
Chain B

click to enlarge
Title How the HIV-1 nucleocapsid protein binds and destabilises the (-)primer binding site during reverse transcription
Classification VIRAL PROTEIN/DNA
Compound HIV-1 nucleocapsid protein NCp7(12-55)
Source (2JZW)
Sequence B:  GTCCCTGTTCGGGC
Description (1)  HIV-1 nucleocapsid protein NCp7(12-55)/DNA Complex


Functional site

1) chain B
residue 103-114
type prosite
ligand
sequence CCCTGTTCGGGC
description EGF-like domain signature 1. C-x-C-x(2)-{V}-x(2)-G-{C}-x-C
source prosite : PS00022


Display surface

Download
Links