eF-site ID 2jmi_10-A
PDB Code 2jmi
Model 10
Chain A

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Title NMR solution structure of PHD finger fragment of Yeast Yng1 protein in free state
Classification PROTEIN BINDING
Compound Protein YNG1
Source Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (YNG1_YEAST)
Sequence A:  QEEVYCFCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAP
KGKWYCSKDCKEIANQRSKS
Description


Functional site

1) chain A
residue 42
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 201
source : AC1

2) chain A
residue 47
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 201
source : AC1

3) chain A
residue 69
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 201
source : AC1

4) chain A
residue 73
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 201
source : AC1

5) chain A
residue 29
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 401
source : AC2

6) chain A
residue 30
type
sequence F
description BINDING SITE FOR RESIDUE ZN A 401
source : AC2

7) chain A
residue 31
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 401
source : AC2

8) chain A
residue 56
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 401
source : AC2

9) chain A
residue 28
type SITE
sequence Y
description Histone H3K4me3 binding => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI3

10) chain A
residue 39
type SITE
sequence M
description Histone H3K4me3 binding => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI3

11) chain A
residue 43
type SITE
sequence D
description Histone H3K4me3 binding => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI3

12) chain A
residue 51
type SITE
sequence W
description Histone H3K4me3 binding => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI3

13) chain A
residue 29
type BINDING
sequence C
description BINDING => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI2

14) chain A
residue 31
type BINDING
sequence C
description BINDING => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI2

15) chain A
residue 42
type BINDING
sequence C
description BINDING => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI2

16) chain A
residue 47
type BINDING
sequence C
description BINDING => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 53
type BINDING
sequence H
description BINDING => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI2

18) chain A
residue 56
type BINDING
sequence C
description BINDING => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI2

19) chain A
residue 69
type BINDING
sequence C
description BINDING => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI2

20) chain A
residue 73
type BINDING
sequence C
description BINDING => ECO:0000250|UniProtKB:Q9UK53
source Swiss-Prot : SWS_FT_FI2

21) chain A
residue 26-75
type ZN_FING
sequence EVYCFCRNVSYGPMVACDNPACPFEWFHYGCVGLKQAPKG
KWYCSKDCKE
description PHD-type; degenerate
source Swiss-Prot : SWS_FT_FI1


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