eF-site ID 2jh5-D
PDB Code 2jh5
Chain D

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Title Human Thrombin Hirugen Inhibitor complex
Classification HYDROLASE/HYDROLASE INHIBITOR
Compound THROMBIN LIGHT CHAIN
Source ORGANISM_COMMON: HUMAN; ORGANISM_SCIENTIFIC: HOMO SAPIENS;
Sequence D:  IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLT
AAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM
LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCL
PDRETAASLLQAGYKGRVTGWGNLKEGQPSVLQVVNLPIV
ERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGP
FVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKK
WIQKVIDQFG
Description (1)  THROMBIN LIGHT CHAIN (E.C.3.4.21.5), THROMBIN HEAVY CHAIN (E.C.3.4.21.5), HIRUDIN IIIA


Functional site

1) chain D
residue 169
type
sequence K
description BINDING SITE FOR RESIDUE CA D 1247
source : AC1

2) chain D
residue 172
type
sequence T
description BINDING SITE FOR RESIDUE CA D 1247
source : AC1

3) chain D
residue 204
type
sequence P
description BINDING SITE FOR RESIDUE CA D 1247
source : AC1

4) chain D
residue 221
type
sequence R
description BINDING SITE FOR RESIDUE NA D 1248
source : AC2

5) chain D
residue 224
type
sequence K
description BINDING SITE FOR RESIDUE NA D 1248
source : AC2

6) chain D
residue 57
type
sequence H
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

7) chain D
residue 60
type
sequence L
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

8) chain D
residue 99
type
sequence L
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

9) chain D
residue 189
type
sequence D
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

10) chain D
residue 190
type
sequence A
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

11) chain D
residue 191
type
sequence C
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

12) chain D
residue 192
type
sequence E
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

13) chain D
residue 213
type
sequence V
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

14) chain D
residue 215
type
sequence W
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

15) chain D
residue 216
type
sequence G
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

16) chain D
residue 219
type
sequence G
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

17) chain D
residue 220
type
sequence C
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

18) chain D
residue 226
type
sequence G
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

19) chain D
residue 227
type
sequence F
description BINDING SITE FOR RESIDUE 895 D 1249
source : AC3

20) chain D
residue 34
type
sequence F
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

21) chain D
residue 40
type
sequence L
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

22) chain D
residue 65
type
sequence L
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

23) chain D
residue 73
type
sequence R
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

24) chain D
residue 74
type
sequence T
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

25) chain D
residue 75
type
sequence R
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

26) chain D
residue 75
type
sequence R
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

27) chain D
residue 76
type
sequence Y
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

28) chain D
residue 81
type
sequence K
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

29) chain D
residue 82
type
sequence I
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

30) chain D
residue 151
type
sequence Q
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

31) chain D
residue 153
type
sequence S
description BINDING SITE FOR CHAIN H OF HIRUDIN IIIA
source : AC4

32) chain D
residue 102
type MOD_RES
sequence D
description Sulfotyrosine => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

33) chain D
residue 195
type MOD_RES
sequence S
description Sulfotyrosine => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

34) chain D
residue 60
type CARBOHYD
sequence L
description N-linked (GlcNAc...) (complex) asparagine => ECO:0000269|PubMed:16335952, ECO:0000269|PubMed:19139490, ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:19838169, ECO:0000269|PubMed:873923
source Swiss-Prot : SWS_FT_FI2

35) chain D
residue 53-58
type prosite
sequence LTAAHC
description TRYPSIN_HIS Serine proteases, trypsin family, histidine active site. LTAAHC
source prosite : PS00134

36) chain D
residue 189-200
type prosite
sequence DACEGDSGGPFV
description TRYPSIN_SER Serine proteases, trypsin family, serine active site. DAceGDSGGPFV
source prosite : PS00135


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