eF-site ID 2ja6-C
PDB Code 2ja6
Chain C

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Title CPD lesion containing RNA Polymerase II elongation complex B
Classification TRANSFERASE
Compound DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT
Source ORGANISM_COMMON: BAKERS' YEAST; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae;
Sequence C:  SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEI
PTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLE
YSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIV
SNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKK
GIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEW
PQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVD
QVVVRGIDTLQKKVASILLALTQMDQD
Description


Functional site
1) chain C
residue 86
type
sequence C
description BINDING SITE FOR RESIDUE ZN A2462
source : AC6
2) chain C
residue 88
type
sequence C
description BINDING SITE FOR RESIDUE ZN A2462
source : AC6
3) chain C
residue 92
type
sequence C
description BINDING SITE FOR RESIDUE ZN A2462
source : AC6
4) chain C
residue 95
type
sequence C
description BINDING SITE FOR RESIDUE ZN A2462
source : AC6
5) chain C
residue 31-71
type prosite
sequence NSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLI
P
description RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSLRRvmiaeiptlAidsVevetNtTvlaDEfIAhRLGLIP
source prosite : PS00446

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