eF-site ID 2ix8-A
PDB Code 2ix8
Chain A

click to enlarge
Title MODEL FOR EEF3 BOUND TO AN 80S RIBOSOME
Classification NUCLEOTIDE-BINDING
Compound ELONGATION FACTOR 3A
Source Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (EF3A_YEAST)
Sequence A:  SDSQQSIKVLEELFQKLSVATADNRHEIASEVASFLNGNI
IEHDVPEHFFGELAKGIKDKKTAANAXQAVAHIANQSNLS
PSVEPYIVQLVPAICTNAGNKDKEIQSVASETLISIVNAV
NPVAIKALLPHLTNAIVETNKWQEKIAILAAFSAXVDAAK
DQVALRXPELIPVLSETXWDTKKEVKAAATAAXTKATETV
DNKDIERFIPSLIQCIADPTEVPETVHLLGATTFVAEVTP
ATLSIXVPLLSRGLNERETGIKRKSAVIIDNXCKLVEDPQ
VIAPFLGKLLPGLKSNFATIADPEAREVTLRALKTLRRVG
NVGEDDAIPELSHAGDVSTTLQVVNELLKDETVAPRFKIV
VEYIAAIGADLIDERIIDQQAWFTHITPYXTIFLHEKKAK
DILDEFRKRAVDNIPVGPNFDDEEDEGEDLCNCEFSLAYG
AKILLNKTQLRLKRARRYGICGPNGCGKSTLXRAIANGQV
DGFPTQEECRTVYVEHDIDGTHSDTSVLDFVFESGVGTKE
AIKDKLIEFGFTDEXIAXPISALSGGWKXKLALARAVLRN
ADILLLDEPTNHLDTVNVAWLVNYLNTCGITSITISHDSV
FLDNVCEYIINYEGLKLRKYKGNFTEFVKKCPAAKAYEEL
SNTDLEFKFPEPGYLEGVKTKQKAIVKVTNXEFQYPGTSK
PQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLPT
SGEVYTHENCRIAYIKQHAFAHIESHLDKTPSEYIQWRFQ
TGEDRETXDRANRQINENDAEAXNKIFKIEGTPRRIAGIH
SRRKFKNTYEYECSFLLGENIGXKSERWVPXXSVDNAWIP
RGELVESHSKXVAEVDXKEALASGQFRPLTRKEIEEHCSX
LGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRPHLIVLD
EPTNYLDRDSLGALSKALKEFEGGVIIITHSAEFTKNLTE
EVWAVKDGRXTPSGHN
Description (1)  ELONGATION FACTOR 3A


Functional site

1) chain A
residue 1543-1557
type prosite
sequence LSGGWKXKLALARAV
description ABC_TRANSPORTER_1 ABC transporters family signature. LSGGWKMKLALARAV
source prosite : PS00211

2) chain A
residue 1896-1910
type prosite
sequence LSGGQKVKLVLAAGT
description ABC_TRANSPORTER_1 ABC transporters family signature. LSGGWKMKLALARAV
source prosite : PS00211

3) chain A
residue 1972
type MOD_RES
sequence P
description Phosphothreonine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI5

4) chain A
residue 1350
type CROSSLNK
sequence D
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
source Swiss-Prot : SWS_FT_FI6

5) chain A
residue 1636
type CROSSLNK
sequence A
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
source Swiss-Prot : SWS_FT_FI6

6) chain A
residue 1463
type BINDING
sequence P
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00434
source Swiss-Prot : SWS_FT_FI1

7) chain A
residue 1701
type BINDING
sequence P
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00434
source Swiss-Prot : SWS_FT_FI1

8) chain A
residue 1002
type MOD_RES
sequence D
description N-acetylserine => ECO:0000269|PubMed:9298649, ECO:0007744|PubMed:22814378
source Swiss-Prot : SWS_FT_FI2

9) chain A
residue 1187
type MOD_RES
sequence A
description N6,N6,N6-trimethyllysine => ECO:0000269|PubMed:22522802
source Swiss-Prot : SWS_FT_FI3

10) chain A
residue 1196
type MOD_RES
sequence A
description N6,N6,N6-trimethyllysine => ECO:0000269|PubMed:22522802
source Swiss-Prot : SWS_FT_FI3

11) chain A
residue 1789
type MOD_RES
sequence I
description N6,N6,N6-trimethyllysine => ECO:0000269|PubMed:22522802
source Swiss-Prot : SWS_FT_FI3

12) chain A
residue 1642
type MOD_RES
sequence N
description Phosphoserine => ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI4

13) chain A
residue 1974
type MOD_RES
sequence G
description Phosphoserine => ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links