eF-site ID 2itw-A
PDB Code 2itw
Chain A

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Title Crystal structure of EGFR kinase domain in complex with AFN941
Classification TRANSFERASE
Compound EPIDERMAL GROWTH FACTOR RECEPTOR
Source null (EGFR_HUMAN)
Sequence A:  GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEG
EKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC
RLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL
NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITD
FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS
DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ
PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP
QRYLVIQGDMDDVVDADEYLI
Description


Functional site

1) chain A
residue 718
type
sequence L
description BINDING SITE FOR RESIDUE ITQ A 2018
source : AC1

2) chain A
residue 719
type
sequence G
description BINDING SITE FOR RESIDUE ITQ A 2018
source : AC1

3) chain A
residue 720
type
sequence S
description BINDING SITE FOR RESIDUE ITQ A 2018
source : AC1

4) chain A
residue 726
type
sequence V
description BINDING SITE FOR RESIDUE ITQ A 2018
source : AC1

5) chain A
residue 743
type
sequence A
description BINDING SITE FOR RESIDUE ITQ A 2018
source : AC1

6) chain A
residue 792
type
sequence L
description BINDING SITE FOR RESIDUE ITQ A 2018
source : AC1

7) chain A
residue 793
type
sequence M
description BINDING SITE FOR RESIDUE ITQ A 2018
source : AC1

8) chain A
residue 794
type
sequence P
description BINDING SITE FOR RESIDUE ITQ A 2018
source : AC1

9) chain A
residue 837
type ACT_SITE
sequence D
description Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10028
source Swiss-Prot : SWS_FT_FI1

10) chain A
residue 718
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:19563760, ECO:0007744|PDB:2GS7, ECO:0007744|PDB:3GT8, ECO:0007744|PDB:4ZSE, ECO:0007744|PDB:5CNN, ECO:0007744|PDB:5CNO, ECO:0007744|PDB:5D41
source Swiss-Prot : SWS_FT_FI2

11) chain A
residue 745
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:17349580, ECO:0000269|PubMed:19563760, ECO:0007744|PDB:2EB3, ECO:0007744|PDB:2GS7, ECO:0007744|PDB:2ITN, ECO:0007744|PDB:3GT8, ECO:0007744|PDB:3VJN, ECO:0007744|PDB:3VJO, ECO:0007744|PDB:4RIW, ECO:0007744|PDB:4RIY, ECO:0007744|PDB:4ZSE, ECO:0007744|PDB:5CNN, ECO:0007744|PDB:5CNO, ECO:0007744|PDB:5D41
source Swiss-Prot : SWS_FT_FI3

12) chain A
residue 1016
type SITE
sequence Y
description Important for interaction with PIK3C2B
source Swiss-Prot : SWS_FT_FI6

13) chain A
residue 718-745
type prosite
sequence LGSGAFGTVYKGLWIPEGEKVKIPVAIK
description PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. LGSGAFGTVYkGlwipegekvkip......VAIK
source prosite : PS00107

14) chain A
residue 833-845
type prosite
sequence LVHRDLAARNVLV
description PROTEIN_KINASE_TYR Tyrosine protein kinases specific active-site signature. LVHrDLAARNVLV
source prosite : PS00109

15) chain A
residue 929
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI14

16) chain A
residue 970
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144
source Swiss-Prot : SWS_FT_FI14

17) chain A
residue 757
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:33996800
source Swiss-Prot : SWS_FT_FI15

18) chain A
residue 960
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:33996800
source Swiss-Prot : SWS_FT_FI15

19) chain A
residue 716
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:33996800
source Swiss-Prot : SWS_FT_FI13

20) chain A
residue 754
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:33996800
source Swiss-Prot : SWS_FT_FI13

21) chain A
residue 867
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:33996800
source Swiss-Prot : SWS_FT_FI13

22) chain A
residue 737
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:16543144, ECO:0000269|PubMed:33996800
source Swiss-Prot : SWS_FT_FI13

23) chain A
residue 1016
type MOD_RES
sequence Y
description Phosphotyrosine; by autocatalysis => ECO:0000269|PubMed:19563760, ECO:0000269|PubMed:23774213
source Swiss-Prot : SWS_FT_FI12

24) chain A
residue 745
type MOD_RES
sequence K
description N6-(2-hydroxyisobutyryl)lysine => ECO:0000269|PubMed:29192674
source Swiss-Prot : SWS_FT_FI7

25) chain A
residue 869
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000269|PubMed:23774213
source Swiss-Prot : SWS_FT_FI8

26) chain A
residue 790
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:17349580, ECO:0000269|PubMed:19563760, ECO:0007744|PDB:2EB3, ECO:0007744|PDB:2GS7, ECO:0007744|PDB:2ITN, ECO:0007744|PDB:2ITV, ECO:0007744|PDB:2ITX, ECO:0007744|PDB:3GT8, ECO:0007744|PDB:3VJN, ECO:0007744|PDB:3VJO, ECO:0007744|PDB:4RIW, ECO:0007744|PDB:4RIX, ECO:0007744|PDB:4RIY, ECO:0007744|PDB:4ZSE, ECO:0007744|PDB:5CNN, ECO:0007744|PDB:5CNO, ECO:0007744|PDB:5D41
source Swiss-Prot : SWS_FT_FI4

27) chain A
residue 855
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:17349580, ECO:0000269|PubMed:19563760, ECO:0007744|PDB:2EB3, ECO:0007744|PDB:2GS7, ECO:0007744|PDB:2ITN, ECO:0007744|PDB:2ITV, ECO:0007744|PDB:2ITX, ECO:0007744|PDB:3GT8, ECO:0007744|PDB:3VJN, ECO:0007744|PDB:4RIW, ECO:0007744|PDB:4RIX, ECO:0007744|PDB:4RIY, ECO:0007744|PDB:4ZSE, ECO:0007744|PDB:5CNN, ECO:0007744|PDB:5CNO, ECO:0007744|PDB:5D41
source Swiss-Prot : SWS_FT_FI5


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