eF-site ID 2ist-A
PDB Code 2ist
Chain A

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Title crystal structure of RluD from E. coli
Classification ISOMERASE
Compound Ribosomal large subunit pseudouridine synthase D
Source Escherichia coli (strain K12) (RLUD_ECOLI)
Sequence A:  AQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWIL
DQRVLVNGKVCDKPKEKVLGGEQVAINAEIERFEPQDIPL
DIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYP
PIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQR
REITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPM
GKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHIT
HPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATML
RLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKDEVD
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Description


Functional site

1) chain A
residue 139
type
sequence D
description BINDING SITE FOR RESIDUE CL A 477
source : AC1

2) chain A
residue 171
type
sequence Y
description BINDING SITE FOR RESIDUE CL A 477
source : AC1

3) chain A
residue 310
type
sequence E
description BINDING SITE FOR RESIDUE BCT A 803
source : AC2

4) chain A
residue 313
type
sequence R
description BINDING SITE FOR RESIDUE BCT A 803
source : AC2

5) chain A
residue 83
type
sequence P
description BINDING SITE FOR RESIDUE BCT A 804
source : AC3

6) chain A
residue 84
type
sequence L
description BINDING SITE FOR RESIDUE BCT A 804
source : AC3

7) chain A
residue 135-149
type prosite
sequence VHRLDKDTTGLMVVA
description PSI_RLU Rlu family of pseudouridine synthase signature. VHRLDkdTTGLMVVA
source prosite : PS01129

8) chain A
residue 140
type ACT_SITE
sequence K
description
source Swiss-Prot : SWS_FT_FI1


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