eF-site ID 2ibz-E
PDB Code 2ibz
Chain E

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Title Yeast Cytochrome BC1 Complex with Stigmatellin
Classification OXIDOREDUCTASE
Compound Ubiquinol-cytochrome-c reductase complex core protein 1
Source ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae;
Sequence E:  KSTYRTPNFDDVLKENNDADKGRSYAYFMVGAMGLLSSAG
AKSTVETFISSMTATADVLAMAKVEVNLAAIPLGKNVVVK
WQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDADRVKDP
QWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGR
IRKGPAPLNLEIPAYEFDGDKVIVG
Description (1)  Ubiquinol-cytochrome-c reductase complex core protein 1, mitochondrial precursor (E.C.1.10.2.2 ), Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial precursor (E.C.1.10.2.2 ), Cytochrome b (E.C.1.10.2.2 ), Cytochrome c1, heme protein, mitochondrial precursor (E.C.1.10.2.2 ), Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial precursor (E.C.1.10.2.2), Ubiquinol-cytochrome c reductase complex 17 kDa protein (E.C.1.10.2.2 ), Ubiquinol-cytochrome c reductase complex 14 kDa protein (E.C.1.10.2.2 ), Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C (E.C.1.10.2.2 ), Ubiquinol-cytochrome c reductase complex 7.3 kDa protein (E.C.1.10.2.2 ), VH chain of antibody fragment, VL chain of antibody fragment


Functional site

1) chain E
residue 159
type
sequence C
description BINDING SITE FOR RESIDUE FES E 4
source : AC4

2) chain E
residue 161
type
sequence H
description BINDING SITE FOR RESIDUE FES E 4
source : AC4

3) chain E
residue 162
type
sequence L
description BINDING SITE FOR RESIDUE FES E 4
source : AC4

4) chain E
residue 178
type
sequence C
description BINDING SITE FOR RESIDUE FES E 4
source : AC4

5) chain E
residue 181
type
sequence H
description BINDING SITE FOR RESIDUE FES E 4
source : AC4

6) chain E
residue 183
type
sequence S
description BINDING SITE FOR RESIDUE FES E 4
source : AC4

7) chain E
residue 181
type
sequence H
description BINDING SITE FOR RESIDUE SMA C 505
source : AC6

8) chain E
residue 181
type catalytic
sequence H
description 208
source MCSA : MCSA1

9) chain E
residue 159
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:10873857, ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1EZV, ECO:0007744|PDB:1KB9, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:1P84, ECO:0007744|PDB:2IBZ, ECO:0007744|PDB:3CX5, ECO:0007744|PDB:3CXH, ECO:0007744|PDB:4PD4
source Swiss-Prot : SWS_FT_FI4

10) chain E
residue 161
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:10873857, ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1EZV, ECO:0007744|PDB:1KB9, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:1P84, ECO:0007744|PDB:2IBZ, ECO:0007744|PDB:3CX5, ECO:0007744|PDB:3CXH, ECO:0007744|PDB:4PD4
source Swiss-Prot : SWS_FT_FI4

11) chain E
residue 178
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:10873857, ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1EZV, ECO:0007744|PDB:1KB9, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:1P84, ECO:0007744|PDB:2IBZ, ECO:0007744|PDB:3CX5, ECO:0007744|PDB:3CXH, ECO:0007744|PDB:4PD4
source Swiss-Prot : SWS_FT_FI4

12) chain E
residue 181
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:10873857, ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1EZV, ECO:0007744|PDB:1KB9, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:1P84, ECO:0007744|PDB:2IBZ, ECO:0007744|PDB:3CX5, ECO:0007744|PDB:3CXH, ECO:0007744|PDB:4PD4
source Swiss-Prot : SWS_FT_FI4

13) chain E
residue 31-50
type TOPO_DOM
sequence KSTYRTPNFDDVLKENNDAD
description Mitochondrial matrix => ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554
source Swiss-Prot : SWS_FT_FI1

14) chain E
residue 51-80
type TRANSMEM
sequence KGRSYAYFMVGAMGLLSSAGAKSTVETFIS
description Helical => ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554
source Swiss-Prot : SWS_FT_FI2

15) chain E
residue 81-215
type TOPO_DOM
sequence SMTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRH
RTPHEIQEANSVDMSALKDPQTDADRVKDPQWLIMLGICT
HLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNL
EIPAYEFDGDKVIVG
description Mitochondrial intermembrane => ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554
source Swiss-Prot : SWS_FT_FI3


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