eF-site ID 2hhp-A
PDB Code 2hhp
Chain A

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Title Structure of yeast poly(A) polymerase in a closed conformation.
Classification TRANSFERASE
Compound Poly(A) polymerase
Source Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (PAP_YEAST)
Sequence A:  QKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQ
ETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGK
IFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSL
LRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQP
QVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPK
PNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARI
CQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQ
VRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKV
ILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLE
ITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAH
PFTKPFESSYCCPTEDDYEMIQDKYGSHKTETALNALKPK
AYLSTMYIGLDFNKEKVDIHIPCTEFVNLCRSFNEDYGDH
KVFNLALRFVKGYDLPDEVFDENEKRPS
Description


Functional site

1) chain A
residue 20
type
sequence A
description BINDING SITE FOR RESIDUE FLC A 531
source : AC1

2) chain A
residue 23
type
sequence N
description BINDING SITE FOR RESIDUE FLC A 531
source : AC1

3) chain A
residue 24
type
sequence K
description BINDING SITE FOR RESIDUE FLC A 531
source : AC1

4) chain A
residue 417
type
sequence T
description BINDING SITE FOR RESIDUE FLC A 531
source : AC1

5) chain A
residue 418
type
sequence E
description BINDING SITE FOR RESIDUE FLC A 531
source : AC1

6) chain A
residue 419
type
sequence D
description BINDING SITE FOR RESIDUE FLC A 531
source : AC1

7) chain A
residue 224
type
sequence Y
description BINDING SITE FOR RESIDUE FLC A 532
source : AC2

8) chain A
residue 232
type
sequence G
description BINDING SITE FOR RESIDUE FLC A 532
source : AC2

9) chain A
residue 233
type
sequence G
description BINDING SITE FOR RESIDUE FLC A 532
source : AC2

10) chain A
residue 234
type
sequence V
description BINDING SITE FOR RESIDUE FLC A 532
source : AC2

11) chain A
residue 102
type
sequence D
description BINDING SITE FOR RESIDUE MG A 533
source : AC3

12) chain A
residue 154
type
sequence D
description BINDING SITE FOR RESIDUE MG A 533
source : AC3

13) chain A
residue 89
type catalytic
sequence S
description 796
source MCSA : MCSA1

14) chain A
residue 100
type catalytic
sequence D
description 796
source MCSA : MCSA1

15) chain A
residue 102
type catalytic
sequence D
description 796
source MCSA : MCSA1

16) chain A
residue 154
type catalytic
sequence D
description 796
source MCSA : MCSA1

17) chain A
residue 215
type catalytic
sequence K
description 796
source MCSA : MCSA1

18) chain A
residue 224
type catalytic
sequence Y
description 796
source MCSA : MCSA1

19) chain A
residue 87
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

20) chain A
residue 99
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

21) chain A
residue 215
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

22) chain A
residue 224
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

23) chain A
residue 233
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:17850751
source Swiss-Prot : SWS_FT_FI1

24) chain A
residue 100
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

25) chain A
residue 102
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

26) chain A
residue 154
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

27) chain A
residue 140
type SITE
sequence F
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

28) chain A
residue 145
type SITE
sequence K
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

29) chain A
residue 294
type SITE
sequence Q
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

30) chain A
residue 314
type SITE
sequence H
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

31) chain A
residue 315
type SITE
sequence N
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

32) chain A
residue 387
type SITE
sequence R
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

33) chain A
residue 392
type SITE
sequence K
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3

34) chain A
residue 487
type SITE
sequence E
description Interaction with RNA
source Swiss-Prot : SWS_FT_FI3


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