|
eF-site ID
|
2hdc_19-ABC |
PDB Code
|
2hdc |
Model
|
19 |
Chain
|
A, B, C |
|
click to enlarge
|
|
Title
|
STRUCTURE OF TRANSCRIPTION FACTOR GENESIS/DNA COMPLEX |
Classification
|
PROTEIN/DNA |
Compound
|
DNA (5'-D(P*GP*CP*TP*TP*AP*AP*AP*AP*TP*AP*AP*CP*AP*AP*TP*AP*C)-3') |
Source
|
Rattus norvegicus (Rat) (2HDC) |
|
Sequence
|
A: |
VKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYR
EKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDP
QSEDMFDNGSFLRRRKR
|
B: |
GCTTAAAATAACAATAC
|
C: |
GTATTGTTATTTTAAGC
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
3-16 |
type |
prosite |
sequence |
KPPYSYIALITMAI
|
description |
FORK_HEAD_1 Fork head domain signature 1. KPPYSYiaLitm.AI
|
source |
prosite : PS00657
|
|
2)
|
chain |
A |
residue |
47-53 |
type |
prosite |
sequence |
WQNSIRH
|
description |
FORK_HEAD_2 Fork head domain signature 2. WQNSIRH
|
source |
prosite : PS00658
|
|
3)
|
chain |
A |
residue |
3-97 |
type |
DNA_BIND |
sequence |
KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYRE
KFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQ
SEDMFDNGSFLRRRK
|
description |
Fork-head => ECO:0000255|PROSITE-ProRule:PRU00089
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|