eF-site ID 2grx-BD
PDB Code 2grx
Chain B, D

click to enlarge
Title Crystal structure of TonB in complex with FhuA, E. coli outer membrane receptor for ferrichrome
Classification METAL TRANSPORT
Compound Ferrichrome-iron receptor
Source (TONB_ECOLI)
Sequence B:  ESAWGPAATIAARQSATGTKTDTPIQKVPQSISVVTAEEM
ALHQPKSVKEALSYTPGVSVGTRGASNTYDHLIIRGFAAE
GQSQNNYLNGLKLQGNFYNDAVIDPYMLERAEIMRGPVSV
LYGKSSPGGLLNMVSKRPTTEPLKEVQFKAGTDSLFQTGF
DFSDSLDDDGVYSYRLTGLARSANAQQKGSEEQRYAIAPA
FTWRPDDKTNFTFLSYFQNEPETGYYGWLPKEGTVEPLPN
GKRLPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQ
NLRFAENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKG
HYLARKYVVDDEKLQNFSVDTQLQSKFATGDIDHTLLTGV
DFMRMRNDINAWFGYDDSVPLLNLTDFDFNAKDPANSGPY
RILNKQKQTGVYVQDQAQWDKVLVTLGGRYDWADQESLNR
VAGTTDKRDDKQFTWRGGVNYLFDNGVTPYFSYSESFEPS
SQVGKDGNIFAPSKGKQYEVGVKYVPEDRPIVVTGAVYNL
TKTNNLMADPEGSFFSVEGGEIRARGVEIEAKAALSASVN
VVGSYTYTDAEYTTDTTYKGNTPAQVPKHMASLWADYTFF
DGPLSGLTLGTGGRYTGSSYGDPANSFKVGSYTVVDALVR
YDLARVGMAGSNVALHVNNLFDREYVASCFNTYGCFWGAE
RQVVATATFRF
D:  RNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAK
PANMFEREVKNAMRRWRYEPGKPGSGIVVNILFKINGT
Description


Functional site

1) chain B
residue 391
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:9856937
source Swiss-Prot : SWS_FT_FI5

2) chain B
residue 702
type BINDING
sequence S
description BINDING => ECO:0000305|PubMed:9856937
source Swiss-Prot : SWS_FT_FI5

3) chain B
residue 183-189
type TOPO_DOM
sequence SLDDDGV
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

4) chain B
residue 223-226
type TOPO_DOM
sequence PDDK
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

5) chain B
residue 289-293
type TOPO_DOM
sequence EFNDT
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

6) chain B
residue 364-371
type TOPO_DOM
sequence KFATGDID
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

7) chain B
residue 441-444
type TOPO_DOM
sequence KQTG
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

8) chain B
residue 485-489
type TOPO_DOM
sequence KQFTW
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

9) chain B
residue 528-532
type TOPO_DOM
sequence KGKQY
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 578-580
type TOPO_DOM
sequence ARG
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

11) chain B
residue 622-628
type TOPO_DOM
sequence KHMASLW
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

12) chain B
residue 666-672
type TOPO_DOM
sequence YTVVDAL
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

13) chain B
residue 714
type TOPO_DOM
sequence E
description Periplasmic => ECO:0000305|PubMed:1885532
source Swiss-Prot : SWS_FT_FI1

14) chain B
residue 313
type BINDING
sequence Y
description BINDING => ECO:0000305|PubMed:10850805, ECO:0000305|PubMed:9856937, ECO:0000305|PubMed:9865695
source Swiss-Prot : SWS_FT_FI4

15) chain B
residue 81
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:10850805, ECO:0000305|PubMed:9856937, ECO:0000305|PubMed:9865695
source Swiss-Prot : SWS_FT_FI4

16) chain B
residue 100
type BINDING
sequence Q
description BINDING => ECO:0000305|PubMed:10850805, ECO:0000305|PubMed:9856937, ECO:0000305|PubMed:9865695
source Swiss-Prot : SWS_FT_FI4

17) chain B
residue 115
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:10850805, ECO:0000305|PubMed:9856937, ECO:0000305|PubMed:9865695
source Swiss-Prot : SWS_FT_FI4

18) chain B
residue 244
type BINDING
sequence Y
description BINDING => ECO:0000305|PubMed:10850805, ECO:0000305|PubMed:9856937, ECO:0000305|PubMed:9865695
source Swiss-Prot : SWS_FT_FI4

19) chain B
residue 533
type SITE
sequence E
description Interaction with phage T5 RBP-pb5 => ECO:0000269|PubMed:36779755
source Swiss-Prot : SWS_FT_FI6

20) chain B
residue 160-168
type TRANSMEM
sequence PLKEVQFKA
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

21) chain B
residue 174-182
type TRANSMEM
sequence FQTGFDFSD
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

22) chain B
residue 190-198
type TRANSMEM
sequence YSYRLTGLA
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

23) chain B
residue 213-222
type TRANSMEM
sequence YAIAPAFTWR
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

24) chain B
residue 227-235
type TRANSMEM
sequence TNFTFLSYF
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

25) chain B
residue 280-288
type TRANSMEM
sequence KMVGYSFDH
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

26) chain B
residue 294-302
type TRANSMEM
sequence FTVRQNLRF
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

27) chain B
residue 355-363
type TRANSMEM
sequence FSVDTQLQS
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

28) chain B
residue 372-380
type TRANSMEM
sequence HTLLTGVDF
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

29) chain B
residue 432-440
type TRANSMEM
sequence GPYRILNKQ
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

30) chain B
residue 445-453
type TRANSMEM
sequence VYVQDQAQW
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

31) chain B
residue 476-484
type TRANSMEM
sequence AGTTDKRDD
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

32) chain B
residue 490-498
type TRANSMEM
sequence RGGVNYLFD
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

33) chain B
residue 519-527
type TRANSMEM
sequence KDGNIFAPS
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

34) chain B
residue 533-541
type TRANSMEM
sequence EVGVKYVPE
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

35) chain B
residue 569-577
type TRANSMEM
sequence FSVEGGEIR
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

36) chain B
residue 581-589
type TRANSMEM
sequence VEIEAKAAL
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

37) chain B
residue 613-621
type TRANSMEM
sequence KGNTPAQVP
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

38) chain B
residue 629-637
type TRANSMEM
sequence ADYTFFDGP
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

39) chain B
residue 657-665
type TRANSMEM
sequence PANSFKVGS
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

40) chain B
residue 673-681
type TRANSMEM
sequence VRYDLARVG
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

41) chain B
residue 705-713
type TRANSMEM
sequence NTYGCFWGA
description Beta stranded
source Swiss-Prot : SWS_FT_FI2

42) chain B
residue 169-173
type TOPO_DOM
sequence GTDSL
description Extracellular
source Swiss-Prot : SWS_FT_FI3

43) chain B
residue 199-212
type TOPO_DOM
sequence RSANAQQKGSEEQR
description Extracellular
source Swiss-Prot : SWS_FT_FI3

44) chain B
residue 236-279
type TOPO_DOM
sequence QNEPETGYYGWLPKEGTVEPLPNGKRLPTDFNEGAKNNTY
SRNE
description Extracellular
source Swiss-Prot : SWS_FT_FI3

45) chain B
residue 303-354
type TOPO_DOM
sequence AENKTSQNSVYGYGVCSDPANAYSKQCAALAPADKGHYLA
RKYVVDDEKLQN
description Extracellular
source Swiss-Prot : SWS_FT_FI3

46) chain B
residue 381-431
type TOPO_DOM
sequence MRMRNDINAWFGYDDSVPLLNLTDFDFNAKDPANS
description Extracellular
source Swiss-Prot : SWS_FT_FI3

47) chain B
residue 454-475
type TOPO_DOM
sequence DKVLVTLGGRYDWADQESLNRV
description Extracellular
source Swiss-Prot : SWS_FT_FI3

48) chain B
residue 499-518
type TOPO_DOM
sequence NGVTPYFSYSESFEPSSQVG
description Extracellular
source Swiss-Prot : SWS_FT_FI3

49) chain B
residue 542-568
type TOPO_DOM
sequence DRPIVVTGAVYNLTKTNNLMADPEGSF
description Extracellular
source Swiss-Prot : SWS_FT_FI3

50) chain B
residue 590-612
type TOPO_DOM
sequence SASVNVVGSYTYTDAEYTTDTTY
description Extracellular
source Swiss-Prot : SWS_FT_FI3

51) chain B
residue 638-656
type TOPO_DOM
sequence LSGLTLGTGGRYTGSSYGD
description Extracellular
source Swiss-Prot : SWS_FT_FI3

52) chain B
residue 682-704
type TOPO_DOM
sequence MAGSNVALHVNNLFDREYVASCF
description Extracellular
source Swiss-Prot : SWS_FT_FI3


Display surface

Download
Links