eF-site ID 2gq2-D
PDB Code 2gq2
Chain D

click to enlarge
Title Mycobacterium tuberculosis ThyX-NADP complex
Classification TRANSFERASE
Compound Thymidylate synthase thyX
Source Mycobacterium tuberculosis (THYX_MYCTU)
Sequence D:  TAPLRVQLIAKTDFLAPPDVPWTTDADGGPALVEFAGRAC
YQSWSKPNPKTATNAGYLRHIXDVGHFSVLEHASVSFYIT
GISRSCTHELIRHRHFSYSQLSQRYRVVVPPGXEDDADLR
HILTEAADAARATYSELLAKLEALRRKQARQAARAVXPNA
TETRIVVTGNYRAWRHFIAXRASEHADVEIRRLAIECLRQ
LAAVAPAVFADFEVTTLADGTEVATS
Description


Functional site

1) chain D
residue 87
type
sequence R
description BINDING SITE FOR RESIDUE IOD A 502
source : AC2

2) chain D
residue 87
type
sequence R
description BINDING SITE FOR RESIDUE IOD D 503
source : AC3

3) chain D
residue 239
type
sequence T
description BINDING SITE FOR RESIDUE IOD D 505
source : AC4

4) chain D
residue 240
type
sequence E
description BINDING SITE FOR RESIDUE IOD D 505
source : AC4

5) chain D
residue 206
type
sequence V
description BINDING SITE FOR RESIDUE IOD D 507
source : AC5

6) chain D
residue 95
type
sequence R
description BINDING SITE FOR RESIDUE NAP A 300
source : BC8

7) chain D
residue 96
type
sequence H
description BINDING SITE FOR RESIDUE NAP A 300
source : BC8

8) chain D
residue 97
type
sequence R
description BINDING SITE FOR RESIDUE NAP A 300
source : BC8

9) chain D
residue 98
type
sequence H
description BINDING SITE FOR RESIDUE NAP A 300
source : BC8

10) chain D
residue 194
type
sequence H
description BINDING SITE FOR RESIDUE NAP A 300
source : BC8

11) chain D
residue 199
type
sequence R
description BINDING SITE FOR RESIDUE NAP A 300
source : BC8

12) chain D
residue 71
type
sequence S
description BINDING SITE FOR RESIDUE NAP B 300
source : BC9

13) chain D
residue 74
type
sequence E
description BINDING SITE FOR RESIDUE NAP B 300
source : BC9

14) chain D
residue 98
type
sequence H
description BINDING SITE FOR RESIDUE NAP B 300
source : BC9

15) chain D
residue 188
type
sequence N
description BINDING SITE FOR RESIDUE NAP B 300
source : BC9

16) chain D
residue 190
type
sequence R
description BINDING SITE FOR RESIDUE NAP B 300
source : BC9

17) chain D
residue 194
type
sequence H
description BINDING SITE FOR RESIDUE NAP B 300
source : BC9

18) chain D
residue 101
type
sequence Y
description BINDING SITE FOR RESIDUE NAP D 300
source : CC3

19) chain D
residue 102
type
sequence S
description BINDING SITE FOR RESIDUE NAP D 300
source : CC3

20) chain D
residue 103
type
sequence Q
description BINDING SITE FOR RESIDUE NAP D 300
source : CC3

21) chain D
residue 105
type
sequence S
description BINDING SITE FOR RESIDUE NAP D 300
source : CC3

22) chain D
residue 14
type
sequence K
description BINDING SITE FOR RESIDUE GOL D 404
source : CC7

23) chain D
residue 15
type
sequence T
description BINDING SITE FOR RESIDUE GOL D 404
source : CC7

24) chain D
residue 32
type
sequence G
description BINDING SITE FOR RESIDUE GOL D 404
source : CC7

25) chain D
residue 77
type
sequence S
description BINDING SITE FOR RESIDUE GOL D 404
source : CC7

26) chain D
residue 78
type
sequence V
description BINDING SITE FOR RESIDUE GOL D 404
source : CC7

27) chain D
residue 189
type
sequence Y
description BINDING SITE FOR RESIDUE GOL D 404
source : CC7

28) chain D
residue 222
type
sequence V
description BINDING SITE FOR RESIDUE GOL D 404
source : CC7

29) chain D
residue 22
type
sequence D
description BINDING SITE FOR RESIDUE GOL D 405
source : CC8

30) chain D
residue 23
type
sequence V
description BINDING SITE FOR RESIDUE GOL D 405
source : CC8

31) chain D
residue 24
type
sequence P
description BINDING SITE FOR RESIDUE GOL D 405
source : CC8

32) chain D
residue 45
type
sequence Q
description BINDING SITE FOR RESIDUE GOL D 405
source : CC8

33) chain D
residue 47
type
sequence W
description BINDING SITE FOR RESIDUE GOL D 405
source : CC8

34) chain D
residue 210
type
sequence R
description BINDING SITE FOR RESIDUE GOL D 408
source : DC1

35) chain D
residue 239
type
sequence T
description BINDING SITE FOR RESIDUE GOL D 408
source : DC1

36) chain D
residue 240
type
sequence E
description BINDING SITE FOR RESIDUE GOL D 408
source : DC1

37) chain D
residue 199
type ACT_SITE
sequence R
description Involved in ionization of N3 of dUMP, leading to its activation => ECO:0000255|HAMAP-Rule:MF_01408
source Swiss-Prot : SWS_FT_FI1

38) chain D
residue 71
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:16139296, ECO:0007744|PDB:2AF6, ECO:0007744|PDB:3GWC, ECO:0007744|PDB:3HZG
source Swiss-Prot : SWS_FT_FI2

39) chain D
residue 95
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:16139296, ECO:0007744|PDB:2AF6, ECO:0007744|PDB:3GWC, ECO:0007744|PDB:3HZG
source Swiss-Prot : SWS_FT_FI2

40) chain D
residue 103
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:16139296, ECO:0007744|PDB:2AF6, ECO:0007744|PDB:3GWC, ECO:0007744|PDB:3HZG
source Swiss-Prot : SWS_FT_FI2

41) chain D
residue 188
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:16139296, ECO:0007744|PDB:2AF6, ECO:0007744|PDB:3GWC, ECO:0007744|PDB:3HZG
source Swiss-Prot : SWS_FT_FI2

42) chain D
residue 194
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:16139296, ECO:0007744|PDB:2AF6, ECO:0007744|PDB:3GWC, ECO:0007744|PDB:3HZG
source Swiss-Prot : SWS_FT_FI2

43) chain D
residue 87
type BINDING
sequence R
description in other chain => ECO:0000305|PubMed:16139296, ECO:0007744|PDB:2AF6
source Swiss-Prot : SWS_FT_FI3

44) chain D
residue 172
type BINDING
sequence R
description in other chain => ECO:0000305|PubMed:16139296, ECO:0007744|PDB:2AF6
source Swiss-Prot : SWS_FT_FI3

45) chain D
residue 92
type BINDING
sequence E
description BINDING => ECO:0000305|PubMed:16139296, ECO:0007744|PDB:2AF6
source Swiss-Prot : SWS_FT_FI4

46) chain D
residue 199
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:16139296, ECO:0007744|PDB:2AF6
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links