eF-site ID 2gm9-A
PDB Code 2gm9
Chain A

click to enlarge
Title Structure of rabbit muscle glycogen phosphorylase in complex with thienopyrrole
Classification TRANSFERASE
Compound Glycogen phosphorylase, muscle form
Source ORGANISM_COMMON: rabbit; ORGANISM_SCIENTIFIC: Oryctolagus cuniculus;
Sequence A:  QISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDY
YFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYM
GRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGL
GNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIC
GGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQ
GAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNG
GYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVV
AATLQDIIRRFKSNFDAFPDKVAIQLNDTHPSLAIPELMR
VLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHL
LETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLV
EEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDF
YELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEY
ISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLER
EYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIK
KEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVN
HDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGT
EASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIF
GMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFS
PKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALY
KNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSR
QRLPA
Description


Functional site

1) chain A
residue 90
type
sequence Y
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

2) chain A
residue 134
type
sequence G
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

3) chain A
residue 491
type
sequence W
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

4) chain A
residue 567
type
sequence V
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

5) chain A
residue 568
type
sequence K
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

6) chain A
residue 574
type
sequence K
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

7) chain A
residue 648
type
sequence Y
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

8) chain A
residue 649
type
sequence R
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

9) chain A
residue 650
type
sequence V
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

10) chain A
residue 675
type
sequence G
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

11) chain A
residue 676
type
sequence T
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

12) chain A
residue 677
type
sequence G
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

13) chain A
residue 680
type
sequence K
description BINDING SITE FOR RESIDUE PLR A 900
source : AC1

14) chain A
residue 37
type
sequence F
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

15) chain A
residue 38
type
sequence T
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

16) chain A
residue 40
type
sequence V
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

17) chain A
residue 53
type
sequence F
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

18) chain A
residue 57
type
sequence H
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

19) chain A
residue 60
type
sequence R
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

20) chain A
residue 67
type
sequence W
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

21) chain A
residue 185
type
sequence Y
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

22) chain A
residue 188
type
sequence P
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

23) chain A
residue 189
type
sequence W
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

24) chain A
residue 190
type
sequence E
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

25) chain A
residue 191
type
sequence K
description BINDING SITE FOR RESIDUE 3TH A 1
source : AC2

26) chain A
residue 514
type MOD_RES
sequence D
description Phosphoserine => ECO:0000250|UniProtKB:P09812
source Swiss-Prot : SWS_FT_FI9

27) chain A
residue 747
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P09812
source Swiss-Prot : SWS_FT_FI9

28) chain A
residue 748
type MOD_RES
sequence G
description Phosphoserine => ECO:0000250|UniProtKB:P09812
source Swiss-Prot : SWS_FT_FI9

29) chain A
residue 681
type MOD_RES
sequence F
description N6-(pyridoxal phosphate)lysine => ECO:0000269|PubMed:7500360, ECO:0000269|PubMed:8976550, ECO:0007744|PDB:2PRI, ECO:0007744|PDB:2SKC, ECO:0007744|PDB:2SKD, ECO:0007744|PDB:2SKE
source Swiss-Prot : SWS_FT_FI10

30) chain A
residue 43
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:P11217
source Swiss-Prot : SWS_FT_FI1

31) chain A
residue 310
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:P11217
source Swiss-Prot : SWS_FT_FI1

32) chain A
residue 76
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:3616621
source Swiss-Prot : SWS_FT_FI2

33) chain A
residue 109
type SITE
sequence D
description Involved in the association of subunits => ECO:0000303|PubMed:728424
source Swiss-Prot : SWS_FT_FI3

34) chain A
residue 143
type SITE
sequence F
description Involved in the association of subunits => ECO:0000303|PubMed:728424
source Swiss-Prot : SWS_FT_FI3

35) chain A
residue 156
type SITE
sequence G
description Can be labeled by an AMP analog; may be involved in allosteric regulation => ECO:0000303|PubMed:728424
source Swiss-Prot : SWS_FT_FI4

36) chain A
residue 15
type MOD_RES
sequence V
description Phosphoserine; by PHK; in form phosphorylase A => ECO:0000250|UniProtKB:P11217
source Swiss-Prot : SWS_FT_FI5

37) chain A
residue 204
type MOD_RES
sequence G
description Phosphotyrosine => ECO:0000250|UniProtKB:P09812
source Swiss-Prot : SWS_FT_FI6

38) chain A
residue 227
type MOD_RES
sequence D
description Phosphotyrosine => ECO:0000250|UniProtKB:P09812
source Swiss-Prot : SWS_FT_FI6

39) chain A
residue 430
type MOD_RES
sequence L
description Phosphoserine => ECO:0000250|UniProtKB:Q9WUB3
source Swiss-Prot : SWS_FT_FI7

40) chain A
residue 473
type MOD_RES
sequence E
description Phosphotyrosine => ECO:0000250|UniProtKB:Q9WUB3
source Swiss-Prot : SWS_FT_FI8

41) chain A
residue 672-684
type prosite
sequence EASGTGNMKFMLN
description PHOSPHORYLASE Phosphorylase pyridoxal-phosphate attachment site. EASGtGnMKfmLN
source prosite : PS00102

42) chain A
residue 378
type catalytic
sequence T
description 205
source MCSA : MCSA1

43) chain A
residue 569
type catalytic
sequence R
description 205
source MCSA : MCSA1

44) chain A
residue 570
type catalytic
sequence I
description 205
source MCSA : MCSA1

45) chain A
residue 575
type catalytic
sequence R
description 205
source MCSA : MCSA1

46) chain A
residue 677
type catalytic
sequence G
description 205
source MCSA : MCSA1

47) chain A
residue 681
type catalytic
sequence F
description 205
source MCSA : MCSA1


Display surface

Download
Links