eF-site ID 2gjw-ABCD PDB Code 2gjw Chain A, B, C, D click to enlarge Title RNA Recognition and Cleavage by an Splicing Endonuclease Classification Hydrolase/RNA Compound 5'-R(*GP*CP*GP*AP*CP*CP*GP*AP*CP*CP*AP*(DU)P*AP*GP*CP*UP*GP*CP*A)-3' Source Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (2GJW) Sequence A:  HHHHIGGDFAVVKAKKSLERRGFGVKRGDKIYLHPLEVVY LQIKGIESFGELEDVLSWAESRMEDFSTYYFVYEDLRDRG NKVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDEL RLAVVDEESEITYFRVYEPDMMGEQKEELPEIAGVLSDEY VITKQTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNL LNADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGF KFGSEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLAR AVRLAQNVRKRMVFAYGKNYLCFERVKV B:  IGGDFAVVKAKKSLERRGFGVKRGDKIYLHPLEVVYLQIK GIESFGELEDVLSWAESRMEDFSTYYFVYEDLRDRGNKVK IQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLAV VDEESEITYFRVYEPDMMGEQKEELPEIAGVLSDEYVITK QTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLLNAD REELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFGS EFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRL AQNVRKRMVFAYGKNYLCFERVKV C:  HHHIGGDFAVVKAKKSLERRGFGVKRGDKIYLHPLEVVYL QIKGIESFGELEDVLSWAESRMEDFSTYYFVYEDLRDRGN KVKIQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELR LAVVDEESEITYFRVYEPDMMGEQKEELPEIAGVLSDEYV ITKQTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLL NADREELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFK FGSEFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARA VRLAQNVRKRMVFAYGKNYLCFERVKV D:  IGGDFAVVKAKKSLERRGFGVKRGDKIYLHPLEVVYLQIK GIESFGELEDVLSWAESRMEDFSTYYFVYEDLRDRGNKVK IQGEFLLTKKPYLPISERKTIRMEEIAEKARNFDELRLAV VDEESEITYFRVYEPDMMGEQKEELPEIAGVLSDEYVITK QTEIFSRYFYGSEKGDLVTLSLIESLYLLDLGKLNLLNAD REELVKRAREVERNFDRRYEVYRNLKERGFVVKTGFKFGS EFRVYRKVESVDDLPHSEYLVDIADSREIRLIDLARAVRL AQNVRKRMVFAYGKNYLCFERVKV Description Functional site 1) chain A residue 249 type ACT_SITE sequence Y description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 2) chain D residue 249 type ACT_SITE sequence Y description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 3) chain D residue 260 type ACT_SITE sequence H description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 4) chain D residue 290 type ACT_SITE sequence K description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 5) chain A residue 260 type ACT_SITE sequence H description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 6) chain A residue 290 type ACT_SITE sequence K description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 7) chain B residue 248 type ACT_SITE sequence Y description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 8) chain B residue 259 type ACT_SITE sequence H description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 9) chain B residue 289 type ACT_SITE sequence K description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 10) chain C residue 248 type ACT_SITE sequence Y description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 11) chain C residue 259 type ACT_SITE sequence H description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1 12) chain C residue 289 type ACT_SITE sequence K description ACT_SITE => ECO:0000255|HAMAP-Rule:MF_01834 source Swiss-Prot : SWS_FT_FI1

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