eF-site ID 2g6v-B
PDB Code 2g6v
Chain B

click to enlarge
Title The crystal structure of ribD from Escherichia coli
Classification HYDROLASE, OXIDOREDUCTASE
Compound Riboflavin biosynthesis protein ribD
Source Escherichia coli (strain K12) (RIBD_ECOLI)
Sequence B:  TLYIQGQDEYYXARALKLAQRGRFTTHPNPNVGCVIVKDG
EIVGEGYHQRAGEPHAEVHALRXAGEKAKGATAYVTLEPC
SDALIAAGVARVVASXQDPNPQVAGRGLYRLQQAGIDVSH
GLXXSEAEQLNKGFLKRXRTGFPYIQLKLGASLDGRTAXA
SGESQWITSPQARRDVQLLRAQSHAILTSSATVLADDPAL
TVRWSELDEQTQALYPQQNLRQPIRIVIDSQNRVTPVHRI
VQQPGETWFARTQEDSREWPETVRTLLIPEHKGHLDLVVL
XXQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPK
LLGSDARGLCTLPGLEKLADAPQFKFKEIRHVGPDVCLHL
VGA
Description (1)  Riboflavin biosynthesis protein ribD (E.C.1.1.1.193, 3.5.4.26)


Functional site

1) chain B
residue 52
type ACT_SITE
sequence E
description Proton donor => ECO:0000250
source Swiss-Prot : SWS_FT_FI1

2) chain B
residue 50
type BINDING
sequence H
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

3) chain B
residue 75
type BINDING
sequence C
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

4) chain B
residue 161
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI3

5) chain B
residue 168
type BINDING
sequence S
description
source Swiss-Prot : SWS_FT_FI3

6) chain B
residue 170
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI3

7) chain B
residue 184
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI3

8) chain B
residue 196
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI3

9) chain B
residue 200
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI3

10) chain B
residue 204
type BINDING
sequence L
description
source Swiss-Prot : SWS_FT_FI3

11) chain B
residue 207
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI3

12) chain B
residue 234
type BINDING
sequence S
description
source Swiss-Prot : SWS_FT_FI3

13) chain B
residue 299
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI3

14) chain B
residue 301
type BINDING
sequence G
description
source Swiss-Prot : SWS_FT_FI3


Display surface

Download
Links