eF-site/Summary 2fid-A

eF-site ID	2fid-A
PDB Code	2fid
Chain	A

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Title	Crystal Structure of a Bovine Rabex-5 fragment complexed with ubiquitin
Classification	PROTEIN TURNOVER/ENDOCYTOSIS
Compound	Ubiquitin
Source	ORGANISM_COMMON: cattle; ORGANISM_SCIENTIFIC: Bos taurus;

Sequence	A:	MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL

Description

Functional site


1)	chain	A
	residue	65
	type	MOD_RES
	sequence	S
	description	Phosphoserine; by PINK1 => ECO:0000250\|UniProtKB:P0CG48
	source	Swiss-Prot : SWS_FT_FI3

2)	chain	A
	residue	72
	type	ZN_FING
	sequence	R
	description	A20-type => ECO:0000255\|PROSITE-ProRule:PRU00451
	source	Swiss-Prot : SWS_FT_FI1

3)	chain	A
	residue	27-52
	type	prosite
	sequence	KAKIQDKEGIPPDQQRLIFAGKQLED
	description	UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
	source	prosite : PS00299

4)	chain	A
	residue	11
	type	CROSSLNK
	sequence	K
	description	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250\|UniProtKB:P0CG48
	source	Swiss-Prot : SWS_FT_FI5

5)	chain	A
	residue	27
	type	CROSSLNK
	sequence	K
	description	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250\|UniProtKB:P0CG48
	source	Swiss-Prot : SWS_FT_FI5

6)	chain	A
	residue	29
	type	CROSSLNK
	sequence	K
	description	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250\|UniProtKB:P0CG48
	source	Swiss-Prot : SWS_FT_FI5

7)	chain	A
	residue	33
	type	CROSSLNK
	sequence	K
	description	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250\|UniProtKB:P0CG48
	source	Swiss-Prot : SWS_FT_FI5

8)	chain	A
	residue	48
	type	CROSSLNK
	sequence	K
	description	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250\|UniProtKB:P0CG48
	source	Swiss-Prot : SWS_FT_FI5

9)	chain	A
	residue	63
	type	CROSSLNK
	sequence	K
	description	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250\|UniProtKB:P0CG48
	source	Swiss-Prot : SWS_FT_FI5

10)	chain	A
	residue	6
	type	CROSSLNK
	sequence	K
	description	Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250\|UniProtKB:P0CG48
	source	Swiss-Prot : SWS_FT_FI5