eF-site ID 2fdp-B
PDB Code 2fdp
Chain B

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Title Crystal structure of beta-secretase complexed with an amino-ethylene inhibitor
Classification HYDROLASE
Compound Beta-secretase 1
Source Homo sapiens (Human) (BACE1_HUMAN)
Sequence B:  SFVEMVDNLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSN
FAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWE
GELGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEG
ILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGA
SVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEI
NGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSI
KAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLM
GEVTNQSFRITILPQQYLRPVDCYKFAISQSSTGTVMGAV
IMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGPFVT
LDMEDCGYN
Description


Functional site

1) chain B
residue 11
type
sequence G
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

2) chain B
residue 12
type
sequence Q
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

3) chain B
residue 13
type
sequence G
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

4) chain B
residue 32
type
sequence D
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

5) chain B
residue 34
type
sequence G
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

6) chain B
residue 35
type
sequence S
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

7) chain B
residue 70
type
sequence P
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

8) chain B
residue 71
type
sequence Y
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

9) chain B
residue 72
type
sequence T
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

10) chain B
residue 73
type
sequence Q
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

11) chain B
residue 108
type
sequence F
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

12) chain B
residue 126
type
sequence I
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

13) chain B
residue 128
type
sequence R
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

14) chain B
residue 228
type
sequence D
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

15) chain B
residue 230
type
sequence G
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

16) chain B
residue 231
type
sequence T
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

17) chain B
residue 232
type
sequence T
description BINDING SITE FOR RESIDUE FRP B 386
source : AC2

18) chain B
residue 80
type ACT_SITE
sequence L
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10094
source Swiss-Prot : SWS_FT_FI1

19) chain B
residue 276
type ACT_SITE
sequence P
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU10094
source Swiss-Prot : SWS_FT_FI1

20) chain B
residue 266
type MOD_RES
sequence Q
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

21) chain B
residue 272
type MOD_RES
sequence A
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

22) chain B
residue 286
type MOD_RES
sequence Y
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

23) chain B
residue 287
type MOD_RES
sequence L
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

24) chain B
residue 294
type MOD_RES
sequence Q
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

25) chain B
residue 113
type MOD_RES
sequence S
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

26) chain B
residue 262
type MOD_RES
sequence W
description N6-acetyllysine => ECO:0000269|PubMed:17425515, ECO:0000269|PubMed:19011241
source Swiss-Prot : SWS_FT_FI2

27) chain B
residue 140
type CARBOHYD
sequence L
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

28) chain B
residue 210
type CARBOHYD
sequence G
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

29) chain B
residue 341
type CARBOHYD
sequence F
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3


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