eF-site ID 2far-B PDB Code 2far Chain B click to enlarge Title Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with dATP and Manganese Classification Hydrolase/Transferase Compound probable ATP-dependent DNA ligase Source Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (Q9I1X7_PSEAE) Sequence B:  RAATAGVRISHPQRLIDPSIQASKLELAEFHARYADLLLR DLRERPVSLVRGPDGIGGELFFQKHAARLKIPGIVQLDPA LDPGHPPLLQIRSAEALVGAVQMGSIEFHTWNASLANLER PDRFVLDLDPDPALPWKRMLEATQLSLTLLDELGLRAFLK TSGGKGMHLLVPLERRHGWDEVKDFAQAISQHLARLMPER FSAVSGPRNRVGKIFVDYLRNSRGASTVAAYSVRAREGLP VSVPVFREELDSLQGANQWNLRSLPQRLDELAGDDPWADY AGTRQRISAAMRRQL Description Functional site 1) chain B residue 669 type sequence D description BINDING SITE FOR RESIDUE MN B 503 source : AC3 2) chain B residue 671 type sequence D description BINDING SITE FOR RESIDUE MN B 503 source : AC3 3) chain B residue 669 type sequence D description BINDING SITE FOR RESIDUE MN B 504 source : AC4 4) chain B residue 671 type sequence D description BINDING SITE FOR RESIDUE MN B 504 source : AC4 5) chain B residue 759 type sequence D description BINDING SITE FOR RESIDUE MN B 504 source : AC4 6) chain B residue 552 type sequence S description BINDING SITE FOR RESIDUE SO4 B 1301 source : AC5 7) chain B residue 553 type sequence H description BINDING SITE FOR RESIDUE SO4 B 1301 source : AC5 8) chain B residue 556 type sequence R description BINDING SITE FOR RESIDUE SO4 B 1301 source : AC5 9) chain B residue 566 type sequence K description BINDING SITE FOR RESIDUE SO4 B 1301 source : AC5 10) chain B residue 750 type sequence R description BINDING SITE FOR RESIDUE SO4 A 1303 source : AC7 11) chain B residue 751 type sequence N description BINDING SITE FOR RESIDUE SO4 A 1303 source : AC7 12) chain B residue 669 type sequence D description BINDING SITE FOR RESIDUE DTP B 1302 source : AC8 13) chain B residue 671 type sequence D description BINDING SITE FOR RESIDUE DTP B 1302 source : AC8 14) chain B residue 704 type sequence S description BINDING SITE FOR RESIDUE DTP B 1302 source : AC8 15) chain B residue 707 type sequence K description BINDING SITE FOR RESIDUE DTP B 1302 source : AC8 16) chain B residue 708 type sequence G description BINDING SITE FOR RESIDUE DTP B 1302 source : AC8 17) chain B residue 710 type sequence H description BINDING SITE FOR RESIDUE DTP B 1302 source : AC8 18) chain B residue 762 type sequence R description BINDING SITE FOR RESIDUE DTP B 1302 source : AC8 19) chain B residue 776 type sequence R description BINDING SITE FOR RESIDUE DTP B 1302 source : AC8 20) chain B residue 778 type sequence R description BINDING SITE FOR RESIDUE DTP B 1302 source : AC8 21) chain B residue 776 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 22) chain B residue 604 type BINDING sequence F description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 23) chain B residue 651 type BINDING sequence H description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 24) chain B residue 704 type BINDING sequence S description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 25) chain B residue 768 type BINDING sequence S description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 26) chain B residue 669 type BINDING sequence D description BINDING => ECO:0000269|PubMed:16446439, ECO:0000269|PubMed:20616014 source Swiss-Prot : SWS_FT_FI2 27) chain B residue 671 type BINDING sequence D description BINDING => ECO:0000269|PubMed:16446439, ECO:0000269|PubMed:20616014 source Swiss-Prot : SWS_FT_FI2 28) chain B residue 759 type BINDING sequence D description BINDING => ECO:0000269|PubMed:16446439, ECO:0000269|PubMed:20616014 source Swiss-Prot : SWS_FT_FI2

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