eF-site ID 2faq-AB PDB Code 2faq Chain A, B click to enlarge Title Crystal Structure of Pseudomonas aeruginosa LigD polymerase domain with ATP and Manganese Classification HYDROLASE/TRANSFERASE Compound probable ATP-dependent DNA ligase Source Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) (Q9I1X7_PSEAE) Sequence A:  RAATAGVRISHPQRLIDPSIQASKLELAEFHARYADLLLR DLRERPVSLVRGPDGIGGELFFQKHAARLKIPGIVQLDPA LDPGHPPLLQIRSAEALVGAVQMGSIEFHTWNASLANLER PDRFVLDLDPDPALPWKRMLEATQLSLTLLDELGLRAFLK TSGGKGMHLLVPLERRHGWDEVKDFAQAISQHLARLMPER FSAVSGPRNRVGKIFVDYLRNSRGASTVAAYSVRAREGLP VSVPVFREELDSLQGANQWNLRSLPQRLDELAGDDPWADY AGTRQRISAAMRRQL B:  RAATAGVRISHPQRLIDPSIQASKLELAEFHARYADLLLR DLRERPVSLVRGPDGIGGELFFQKHAARLKIPGIVQLDPA LDPGHPPLLQIRSAEALVGAVQMGSIEFHTWNASLANLER PDRFVLDLDPDPALPWKRMLEATQLSLTLLDELGLRAFLK TSGGKGMHLLVPLERRHGWDEVKDFAQAISQHLARLMPER FSAVSGPRNRVGKIFVDYLRNSRGASTVAAYSVRAREGLP VSVPVFREELDSLQGANQWNLRSLPQRLDELAGDDPWADY AGTRQRISAAMRRQL Description Functional site 1) chain A residue 669 type sequence D description BINDING SITE FOR RESIDUE MN A 501 source : AC1 2) chain A residue 671 type sequence D description BINDING SITE FOR RESIDUE MN A 501 source : AC1 3) chain A residue 669 type sequence D description BINDING SITE FOR RESIDUE MN A 502 source : AC2 4) chain A residue 671 type sequence D description BINDING SITE FOR RESIDUE MN A 502 source : AC2 5) chain A residue 759 type sequence D description BINDING SITE FOR RESIDUE MN A 502 source : AC2 6) chain A residue 762 type sequence R description BINDING SITE FOR RESIDUE MN A 502 source : AC2 7) chain B residue 669 type sequence D description BINDING SITE FOR RESIDUE MN B 503 source : AC3 8) chain B residue 671 type sequence D description BINDING SITE FOR RESIDUE MN B 503 source : AC3 9) chain B residue 669 type sequence D description BINDING SITE FOR RESIDUE MN B 504 source : AC4 10) chain B residue 671 type sequence D description BINDING SITE FOR RESIDUE MN B 504 source : AC4 11) chain B residue 759 type sequence D description BINDING SITE FOR RESIDUE MN B 504 source : AC4 12) chain B residue 762 type sequence R description BINDING SITE FOR RESIDUE MN B 504 source : AC4 13) chain B residue 552 type sequence S description BINDING SITE FOR RESIDUE SO4 B 1301 source : AC5 14) chain B residue 553 type sequence H description BINDING SITE FOR RESIDUE SO4 B 1301 source : AC5 15) chain B residue 556 type sequence R description BINDING SITE FOR RESIDUE SO4 B 1301 source : AC5 16) chain B residue 566 type sequence K description BINDING SITE FOR RESIDUE SO4 B 1301 source : AC5 17) chain A residue 552 type sequence S description BINDING SITE FOR RESIDUE SO4 A 1302 source : AC6 18) chain A residue 553 type sequence H description BINDING SITE FOR RESIDUE SO4 A 1302 source : AC6 19) chain A residue 556 type sequence R description BINDING SITE FOR RESIDUE SO4 A 1302 source : AC6 20) chain A residue 566 type sequence K description BINDING SITE FOR RESIDUE SO4 A 1302 source : AC6 21) chain A residue 750 type sequence R description BINDING SITE FOR RESIDUE SO4 A 1303 source : AC7 22) chain A residue 751 type sequence N description BINDING SITE FOR RESIDUE SO4 A 1303 source : AC7 23) chain B residue 750 type sequence R description BINDING SITE FOR RESIDUE SO4 A 1303 source : AC7 24) chain B residue 751 type sequence N description BINDING SITE FOR RESIDUE SO4 A 1303 source : AC7 25) chain B residue 604 type sequence F description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 26) chain B residue 651 type sequence H description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 27) chain B residue 669 type sequence D description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 28) chain B residue 671 type sequence D description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 29) chain B residue 704 type sequence S description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 30) chain B residue 707 type sequence K description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 31) chain B residue 708 type sequence G description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 32) chain B residue 710 type sequence H description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 33) chain B residue 762 type sequence R description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 34) chain B residue 768 type sequence S description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 35) chain B residue 769 type sequence T description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 36) chain B residue 776 type sequence R description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 37) chain B residue 778 type sequence R description BINDING SITE FOR RESIDUE ATP B 1302 source : AC8 38) chain A residue 604 type sequence F description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 39) chain A residue 651 type sequence H description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 40) chain A residue 669 type sequence D description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 41) chain A residue 671 type sequence D description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 42) chain A residue 704 type sequence S description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 43) chain A residue 707 type sequence K description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 44) chain A residue 708 type sequence G description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 45) chain A residue 710 type sequence H description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 46) chain A residue 762 type sequence R description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 47) chain A residue 768 type sequence S description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 48) chain A residue 776 type sequence R description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 49) chain A residue 778 type sequence R description BINDING SITE FOR RESIDUE ATP A 1304 source : AC9 50) chain A residue 604 type BINDING sequence F description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 51) chain B residue 776 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 52) chain A residue 651 type BINDING sequence H description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 53) chain A residue 704 type BINDING sequence S description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 54) chain A residue 768 type BINDING sequence S description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 55) chain A residue 776 type BINDING sequence R description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 56) chain B residue 604 type BINDING sequence F description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 57) chain B residue 651 type BINDING sequence H description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 58) chain B residue 704 type BINDING sequence S description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 59) chain B residue 768 type BINDING sequence S description BINDING => ECO:0000269|PubMed:16446439 source Swiss-Prot : SWS_FT_FI1 60) chain A residue 669 type BINDING sequence D description BINDING => ECO:0000269|PubMed:16446439, ECO:0000269|PubMed:20616014 source Swiss-Prot : SWS_FT_FI2 61) chain A residue 671 type BINDING sequence D description BINDING => ECO:0000269|PubMed:16446439, ECO:0000269|PubMed:20616014 source Swiss-Prot : SWS_FT_FI2 62) chain A residue 759 type BINDING sequence D description BINDING => ECO:0000269|PubMed:16446439, ECO:0000269|PubMed:20616014 source Swiss-Prot : SWS_FT_FI2 63) chain B residue 669 type BINDING sequence D description BINDING => ECO:0000269|PubMed:16446439, ECO:0000269|PubMed:20616014 source Swiss-Prot : SWS_FT_FI2 64) chain B residue 671 type BINDING sequence D description BINDING => ECO:0000269|PubMed:16446439, ECO:0000269|PubMed:20616014 source Swiss-Prot : SWS_FT_FI2 65) chain B residue 759 type BINDING sequence D description BINDING => ECO:0000269|PubMed:16446439, ECO:0000269|PubMed:20616014 source Swiss-Prot : SWS_FT_FI2

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