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eF-site ID
|
2efd-ABCD |
PDB Code
|
2efd |
Chain
|
A, B, C, D |
|
click to enlarge
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Title
|
Ara7/AtVps9a |
Classification
|
TRANSPORT PROTEIN |
Compound
|
Similarity to vacuolar protein sorting-associated protein VPS9 |
Source
|
Arabidopsis thaliana (Mouse-ear cress) (Q9SN68_ARATH) |
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Sequence
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A: |
MRKPSAGDFVKSIKSFIVSFSNNAPDPEKDCAMVQEFFSK
MEAAFRAHPLWSGCSEEELDSAGDGLEKYVMTKLFTRVFA
SNTEEVIADEKLFQKMSLVQQFISPENLDIQPTFQNESSW
LLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIA
SNENAPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRE
SKLVGEAAYFFTNILSAESFISNIDAKSISLDEAEFEKNM
ESARAR
|
B: |
SINAKLVLLGDVGAGKSSLVLRFVAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFER
AKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQT
YAQENGLFFMETSAKTATNVKEIFYEIARRLP
|
C: |
MRKPSAGDFVKSIKSFIVSFSNNAPDPEKDCAMVQEFFSK
MEAAFRAHPLWSGCSEEELDSAGDGLEKYVMTKLFTRVFA
SNTEEVIADEKLFQKMSLVQQFISPENLDIQPTFQNESSW
LLAQKELQKINMYKAPRDKLVCILNCCKVINNLLLNASIA
SNENAPGADEFLPVLIYVTIKANPPQLHSNLLYIQRYRRE
SKLVGEAAYFFTNILSAESFISNIDAKSISLDEAEFEKNM
ESARAR
|
D: |
SINAKLVLLGDVGAGKSSLVLRFVAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFER
AKKWVQELQAQGNPNMVMALAGNKSDLLDARKVTAEDAQT
YAQENGLFFMETSAKTATNVKEIFYEIARRLP
|
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Description
|
|
Functional site
|
|
1)
|
chain |
B |
residue |
17 |
type |
BINDING |
sequence |
G
|
description |
BINDING => ECO:0000269|PubMed:20833725, ECO:0007744|PDB:2EFC, ECO:0007744|PDB:2EFH
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
2)
|
chain |
B |
residue |
65 |
type |
BINDING |
sequence |
D
|
description |
BINDING => ECO:0000269|PubMed:20833725, ECO:0007744|PDB:2EFC, ECO:0007744|PDB:2EFH
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
B |
residue |
123 |
type |
BINDING |
sequence |
N
|
description |
BINDING => ECO:0000269|PubMed:20833725, ECO:0007744|PDB:2EFC, ECO:0007744|PDB:2EFH
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
4)
|
chain |
B |
residue |
153 |
type |
BINDING |
sequence |
S
|
description |
BINDING => ECO:0000269|PubMed:20833725, ECO:0007744|PDB:2EFC, ECO:0007744|PDB:2EFH
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
5)
|
chain |
D |
residue |
17 |
type |
BINDING |
sequence |
G
|
description |
BINDING => ECO:0000269|PubMed:20833725, ECO:0007744|PDB:2EFC, ECO:0007744|PDB:2EFH
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
6)
|
chain |
D |
residue |
65 |
type |
BINDING |
sequence |
D
|
description |
BINDING => ECO:0000269|PubMed:20833725, ECO:0007744|PDB:2EFC, ECO:0007744|PDB:2EFH
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
7)
|
chain |
D |
residue |
123 |
type |
BINDING |
sequence |
N
|
description |
BINDING => ECO:0000269|PubMed:20833725, ECO:0007744|PDB:2EFC, ECO:0007744|PDB:2EFH
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
8)
|
chain |
D |
residue |
153 |
type |
BINDING |
sequence |
S
|
description |
BINDING => ECO:0000269|PubMed:20833725, ECO:0007744|PDB:2EFC, ECO:0007744|PDB:2EFH
|
source |
Swiss-Prot : SWS_FT_FI1
|
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